Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PCDH1Q08174 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH1Q08174 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH1Q08174 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PCDH1Q08174 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH1Q08174 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.06■□□□□ 0.16
PCDH1Q08174 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.06■□□□□ 0.16
PCDH1Q08174 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH1Q08174 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH1Q08174 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
PCDH1Q08174 AC026396.1-201ENST00000419388 421 ntBASIC16.06■□□□□ 0.16
PCDH1Q08174 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.06■□□□□ 0.16
PCDH1Q08174 POU5F1P6-201ENST00000466990 990 ntBASIC16.06■□□□□ 0.16
PCDH1Q08174 AL031432.2-201ENST00000566714 459 ntBASIC16.06■□□□□ 0.16
PCDH1Q08174 AL928711.1-201ENST00000570165 459 ntBASIC16.06■□□□□ 0.16
PCDH1Q08174 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH1Q08174 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH1Q08174 AC020765.3-201ENST00000613051 740 ntBASIC16.06■□□□□ 0.16
PCDH1Q08174 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH1Q08174 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDH1Q08174 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH1Q08174 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDH1Q08174 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH1Q08174 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PCDH1Q08174 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PCDH1Q08174 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH1Q08174 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH1Q08174 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PCDH1Q08174 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH1Q08174 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDH1Q08174 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDH1Q08174 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH1Q08174 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH1Q08174 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDH1Q08174 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH1Q08174 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
PCDH1Q08174 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH1Q08174 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH1Q08174 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH1Q08174 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDH1Q08174 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDH1Q08174 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDH1Q08174 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDH1Q08174 RNU1-129P-201ENST00000384064 167 ntBASIC16.05■□□□□ 0.16
PCDH1Q08174 CRYGEP-201ENST00000412192 528 ntBASIC16.05■□□□□ 0.16
PCDH1Q08174 PMS2P4-201ENST00000412466 1052 ntBASIC16.05■□□□□ 0.16
PCDH1Q08174 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
PCDH1Q08174 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDH1Q08174 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH1Q08174 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
PCDH1Q08174 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDH1Q08174 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDH1Q08174 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDH1Q08174 U1.21-201ENST00000580816 167 ntBASIC16.05■□□□□ 0.16
PCDH1Q08174 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDH1Q08174 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH1Q08174 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDH1Q08174 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
PCDH1Q08174 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PCDH1Q08174 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDH1Q08174 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDH1Q08174 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDH1Q08174 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDH1Q08174 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH1Q08174 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDH1Q08174 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH1Q08174 AL162727.3-201ENST00000635661 2787 ntBASIC16.04■□□□□ 0.16
PCDH1Q08174 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH1Q08174 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH1Q08174 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH1Q08174 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH1Q08174 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH1Q08174 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH1Q08174 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH1Q08174 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH1Q08174 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH1Q08174 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PCDH1Q08174 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH1Q08174 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH1Q08174 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH1Q08174 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH1Q08174 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
PCDH1Q08174 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms