Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.73■□□□□ 0.59
TPM4P67936 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TPM4P67936 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
TPM4P67936 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.72■□□□□ 0.59
TPM4P67936 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.72■□□□□ 0.59
TPM4P67936 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM4P67936 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.72■□□□□ 0.59
TPM4P67936 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM4P67936 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM4P67936 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.72■□□□□ 0.59
TPM4P67936 AC097493.4-201ENST00000641197 219 ntBASIC18.72■□□□□ 0.59
TPM4P67936 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.72■□□□□ 0.59
TPM4P67936 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 GGT3P-204ENST00000453783 1664 ntBASIC18.72■□□□□ 0.59
TPM4P67936 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
TPM4P67936 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM4P67936 PMPCAP1-201ENST00000508114 1576 ntBASIC18.72■□□□□ 0.59
TPM4P67936 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM4P67936 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.72■□□□□ 0.59
TPM4P67936 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.72■□□□□ 0.59
TPM4P67936 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TPM4P67936 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM4P67936 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
TPM4P67936 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TPM4P67936 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TPM4P67936 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.71■□□□□ 0.59
TPM4P67936 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.71■□□□□ 0.59
TPM4P67936 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.71■□□□□ 0.59
TPM4P67936 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.71■□□□□ 0.59
TPM4P67936 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.71■□□□□ 0.59
TPM4P67936 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.71■□□□□ 0.59
TPM4P67936 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.71■□□□□ 0.59
TPM4P67936 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.71■□□□□ 0.59
TPM4P67936 AL161772.1-201ENST00000610494 4412 ntBASIC18.71■□□□□ 0.59
TPM4P67936 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TPM4P67936 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.71■□□□□ 0.59
TPM4P67936 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC18.71■□□□□ 0.59
TPM4P67936 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM4P67936 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.71■□□□□ 0.59
TPM4P67936 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.71■□□□□ 0.58
TPM4P67936 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
TPM4P67936 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.7■□□□□ 0.58
TPM4P67936 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM4P67936 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM4P67936 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.7■□□□□ 0.58
TPM4P67936 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.7■□□□□ 0.58
TPM4P67936 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.7■□□□□ 0.58
TPM4P67936 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM4P67936 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM4P67936 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM4P67936 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
TPM4P67936 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM4P67936 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM4P67936 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM4P67936 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM4P67936 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPM4P67936 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.7■□□□□ 0.58
TPM4P67936 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.7■□□□□ 0.58
TPM4P67936 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms