Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RPS4XP62701 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPS4XP62701 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPS4XP62701 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.04■□□□□ -0
RPS4XP62701 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPS4XP62701 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.04■□□□□ -0
RPS4XP62701 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.04■□□□□ -0
RPS4XP62701 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RPS4XP62701 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPS4XP62701 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPS4XP62701 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPS4XP62701 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.04■□□□□ -0
RPS4XP62701 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.04■□□□□ -0
RPS4XP62701 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.04■□□□□ -0
RPS4XP62701 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.03■□□□□ -0
RPS4XP62701 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.03■□□□□ -0
RPS4XP62701 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPS4XP62701 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.03■□□□□ -0
RPS4XP62701 GPAA1P2-202ENST00000606848 1787 ntBASIC15.03■□□□□ -0
RPS4XP62701 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RPS4XP62701 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPS4XP62701 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RPS4XP62701 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.03■□□□□ -0
RPS4XP62701 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.03■□□□□ -0
RPS4XP62701 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPS4XP62701 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.03■□□□□ -0
RPS4XP62701 GPX1P2-201ENST00000429271 606 ntBASIC15.03■□□□□ -0
RPS4XP62701 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.03■□□□□ -0
RPS4XP62701 AC009947.1-201ENST00000444350 727 ntBASIC15.03■□□□□ -0
RPS4XP62701 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.03■□□□□ -0
RPS4XP62701 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.03■□□□□ -0
RPS4XP62701 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.03■□□□□ -0
RPS4XP62701 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.03■□□□□ -0
RPS4XP62701 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPS4XP62701 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPS4XP62701 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.03■□□□□ -0
RPS4XP62701 AC079328.2-201ENST00000561241 3354 ntBASIC15.03■□□□□ -0
RPS4XP62701 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.03■□□□□ -0
RPS4XP62701 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPS4XP62701 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.03■□□□□ -0
RPS4XP62701 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPS4XP62701 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.03■□□□□ -0
RPS4XP62701 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RPS4XP62701 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.03■□□□□ -0
RPS4XP62701 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.03■□□□□ -0
RPS4XP62701 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.03■□□□□ -0
RPS4XP62701 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPS4XP62701 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RPS4XP62701 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.02■□□□□ -0
RPS4XP62701 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.02■□□□□ -0
RPS4XP62701 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
RPS4XP62701 PCDHA1-201ENST00000378133 2726 ntBASIC15.02■□□□□ -0
RPS4XP62701 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RPS4XP62701 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RPS4XP62701 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
RPS4XP62701 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RPS4XP62701 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.02■□□□□ -0
RPS4XP62701 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RPS4XP62701 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.02■□□□□ -0
RPS4XP62701 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.02■□□□□ -0
RPS4XP62701 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.02■□□□□ -0
RPS4XP62701 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.02■□□□□ -0
RPS4XP62701 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPS4XP62701 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.02■□□□□ -0
RPS4XP62701 RPSAP43-201ENST00000402237 625 ntBASIC15.02■□□□□ -0
RPS4XP62701 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.02■□□□□ -0
RPS4XP62701 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RPS4XP62701 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
RPS4XP62701 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RPS4XP62701 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.02■□□□□ -0
RPS4XP62701 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.02■□□□□ -0
RPS4XP62701 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.02■□□□□ -0
RPS4XP62701 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.02■□□□□ -0
RPS4XP62701 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.02■□□□□ -0
RPS4XP62701 AP001350.2-201ENST00000625104 1094 ntBASIC15.02■□□□□ -0
RPS4XP62701 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.02■□□□□ -0
RPS4XP62701 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.02□□□□□ -0.01
RPS4XP62701 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RPS4XP62701 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPS4XP62701 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms