Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CMC4P56277 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CMC4P56277 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 SPDYE11-202ENST00000450699 704 ntBASIC12.38□□□□□ -0.43
CMC4P56277 CEND1P1-201ENST00000451006 455 ntBASIC12.38□□□□□ -0.43
CMC4P56277 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.38□□□□□ -0.43
CMC4P56277 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CMC4P56277 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
CMC4P56277 KRT8P23-201ENST00000560090 1207 ntBASIC12.38□□□□□ -0.43
CMC4P56277 SPDYE9P-201ENST00000570642 692 ntBASIC12.38□□□□□ -0.43
CMC4P56277 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.38□□□□□ -0.43
CMC4P56277 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.38□□□□□ -0.43
CMC4P56277 AC026120.1-201ENST00000611536 926 ntBASIC12.38□□□□□ -0.43
CMC4P56277 SPDYE10P-202ENST00000612005 668 ntBASIC12.38□□□□□ -0.43
CMC4P56277 SPDYE8P-202ENST00000612377 668 ntBASIC12.38□□□□□ -0.43
CMC4P56277 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
CMC4P56277 AC091812.2-201ENST00000619081 385 ntBASIC12.38□□□□□ -0.43
CMC4P56277 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CMC4P56277 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.38□□□□□ -0.43
CMC4P56277 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.38□□□□□ -0.43
CMC4P56277 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CMC4P56277 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CMC4P56277 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CMC4P56277 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CMC4P56277 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CMC4P56277 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CMC4P56277 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.37□□□□□ -0.43
CMC4P56277 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CMC4P56277 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
CMC4P56277 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.37□□□□□ -0.43
CMC4P56277 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 ELL2P1-201ENST00000413990 1906 ntBASIC12.37□□□□□ -0.43
CMC4P56277 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC12.37□□□□□ -0.43
CMC4P56277 AL645728.1-201ENST00000366221 2101 ntBASIC12.37□□□□□ -0.43
CMC4P56277 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.37□□□□□ -0.43
CMC4P56277 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
CMC4P56277 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
CMC4P56277 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.37□□□□□ -0.43
CMC4P56277 POU5F1P6-201ENST00000466990 990 ntBASIC12.37□□□□□ -0.43
CMC4P56277 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.37□□□□□ -0.43
CMC4P56277 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CMC4P56277 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 AL078644.1-201ENST00000609881 752 ntBASIC12.37□□□□□ -0.43
CMC4P56277 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.37□□□□□ -0.43
CMC4P56277 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.37□□□□□ -0.43
CMC4P56277 PRORSD1P-202ENST00000563365 2154 ntBASIC12.37□□□□□ -0.43
CMC4P56277 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC12.37□□□□□ -0.43
CMC4P56277 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CMC4P56277 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.37□□□□□ -0.43
CMC4P56277 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.37□□□□□ -0.43
CMC4P56277 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
CMC4P56277 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CMC4P56277 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.37□□□□□ -0.43
CMC4P56277 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.36□□□□□ -0.43
CMC4P56277 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CMC4P56277 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 AC126755.1-201ENST00000525846 6405 ntBASIC12.36□□□□□ -0.43
CMC4P56277 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMC4P56277 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms