Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGA8P53708 PAWRP1-201ENST00000451083 565 ntBASIC17.12■□□□□ 0.33
ITGA8P53708 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGA8P53708 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.12■□□□□ 0.33
ITGA8P53708 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ITGA8P53708 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.12■□□□□ 0.33
ITGA8P53708 AL139424.1-201ENST00000607572 797 ntBASIC17.12■□□□□ 0.33
ITGA8P53708 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGA8P53708 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.12■□□□□ 0.33
ITGA8P53708 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGA8P53708 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGA8P53708 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGA8P53708 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGA8P53708 AL022326.1-202ENST00000641533 845 ntBASIC17.12■□□□□ 0.33
ITGA8P53708 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGA8P53708 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ITGA8P53708 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGA8P53708 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ITGA8P53708 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGA8P53708 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA8P53708 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGA8P53708 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA8P53708 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA8P53708 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA8P53708 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA8P53708 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGA8P53708 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA8P53708 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA8P53708 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA8P53708 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA8P53708 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA8P53708 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGA8P53708 AC132008.2-207ENST00000454517 770 ntBASIC17.11■□□□□ 0.33
ITGA8P53708 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGA8P53708 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
ITGA8P53708 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA8P53708 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ITGA8P53708 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.11■□□□□ 0.33
ITGA8P53708 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA8P53708 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA8P53708 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
ITGA8P53708 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ITGA8P53708 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ITGA8P53708 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA8P53708 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.11■□□□□ 0.33
ITGA8P53708 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA8P53708 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ITGA8P53708 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGA8P53708 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ITGA8P53708 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGA8P53708 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA8P53708 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA8P53708 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.1■□□□□ 0.33
ITGA8P53708 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA8P53708 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.1■□□□□ 0.33
ITGA8P53708 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.1■□□□□ 0.33
ITGA8P53708 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA8P53708 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ITGA8P53708 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.1■□□□□ 0.33
ITGA8P53708 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA8P53708 REXO1L8P-201ENST00000604378 1897 ntBASIC17.1■□□□□ 0.33
ITGA8P53708 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA8P53708 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA8P53708 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA8P53708 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.1■□□□□ 0.33
ITGA8P53708 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA8P53708 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA8P53708 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA8P53708 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ITGA8P53708 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.1■□□□□ 0.33
ITGA8P53708 NKAPP1-205ENST00000585790 367 ntBASIC17.1■□□□□ 0.33
ITGA8P53708 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ITGA8P53708 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
ITGA8P53708 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA8P53708 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ITGA8P53708 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA8P53708 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
ITGA8P53708 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ITGA8P53708 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ITGA8P53708 TSPY26P-202ENST00000565928 3884 ntBASIC17.1■□□□□ 0.33
ITGA8P53708 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.1■□□□□ 0.33
ITGA8P53708 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.1■□□□□ 0.33
ITGA8P53708 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
ITGA8P53708 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms