Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.29■□□□□ 0.52
CDK7P50613 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 AP006294.1-201ENST00000415407 339 ntBASIC18.29■□□□□ 0.52
CDK7P50613 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.29■□□□□ 0.52
CDK7P50613 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.29■□□□□ 0.52
CDK7P50613 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 AC106886.1-201ENST00000568660 600 ntBASIC18.29■□□□□ 0.52
CDK7P50613 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.29■□□□□ 0.52
CDK7P50613 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CDK7P50613 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDK7P50613 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.29■□□□□ 0.52
CDK7P50613 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.29■□□□□ 0.52
CDK7P50613 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDK7P50613 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDK7P50613 AC116353.5-201ENST00000638148 1699 ntBASIC18.28■□□□□ 0.52
CDK7P50613 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK7P50613 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.28■□□□□ 0.52
CDK7P50613 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDK7P50613 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDK7P50613 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK7P50613 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CDK7P50613 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CDK7P50613 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDK7P50613 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK7P50613 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK7P50613 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK7P50613 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK7P50613 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.28■□□□□ 0.52
CDK7P50613 ACA64.2-201ENST00000459014 129 ntBASIC18.28■□□□□ 0.52
CDK7P50613 RN7SL752P-201ENST00000463779 287 ntBASIC18.28■□□□□ 0.52
CDK7P50613 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDK7P50613 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDK7P50613 AC017083.2-201ENST00000608069 979 ntBASIC18.28■□□□□ 0.52
CDK7P50613 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
CDK7P50613 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.28■□□□□ 0.52
CDK7P50613 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDK7P50613 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK7P50613 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK7P50613 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK7P50613 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.28■□□□□ 0.52
CDK7P50613 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK7P50613 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.28■□□□□ 0.52
CDK7P50613 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDK7P50613 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDK7P50613 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDK7P50613 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.27■□□□□ 0.52
CDK7P50613 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.27■□□□□ 0.52
CDK7P50613 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK7P50613 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CDK7P50613 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK7P50613 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK7P50613 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDK7P50613 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK7P50613 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK7P50613 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CDK7P50613 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.27■□□□□ 0.52
CDK7P50613 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDK7P50613 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.27■□□□□ 0.52
CDK7P50613 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CDK7P50613 RPS2P32-201ENST00000439199 892 ntBASIC18.27■□□□□ 0.52
CDK7P50613 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.27■□□□□ 0.52
CDK7P50613 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CDK7P50613 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK7P50613 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.27■□□□□ 0.52
CDK7P50613 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK7P50613 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CDK7P50613 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDK7P50613 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDK7P50613 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDK7P50613 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDK7P50613 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.27■□□□□ 0.51
CDK7P50613 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
CDK7P50613 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.27■□□□□ 0.51
CDK7P50613 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDK7P50613 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.51
CDK7P50613 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.27■□□□□ 0.51
CDK7P50613 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.26■□□□□ 0.51
CDK7P50613 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CDK7P50613 AC124067.4-201ENST00000519691 2379 ntBASIC18.26■□□□□ 0.51
CDK7P50613 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.26■□□□□ 0.51
CDK7P50613 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 SPDYE19P-201ENST00000338590 713 ntBASIC18.26■□□□□ 0.51
CDK7P50613 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.26■□□□□ 0.51
CDK7P50613 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.26■□□□□ 0.51
CDK7P50613 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms