Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MTHFRP42898 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MTHFRP42898 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.35■□□□□ 0.37
MTHFRP42898 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MTHFRP42898 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.35■□□□□ 0.37
MTHFRP42898 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.35■□□□□ 0.37
MTHFRP42898 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
MTHFRP42898 FAM220BP-201ENST00000377689 816 ntBASIC17.35■□□□□ 0.37
MTHFRP42898 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.35■□□□□ 0.37
MTHFRP42898 AC087499.6-201ENST00000411576 835 ntBASIC17.35■□□□□ 0.37
MTHFRP42898 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.35■□□□□ 0.37
MTHFRP42898 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.35■□□□□ 0.37
MTHFRP42898 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MTHFRP42898 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.35■□□□□ 0.37
MTHFRP42898 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.35■□□□□ 0.37
MTHFRP42898 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.35■□□□□ 0.37
MTHFRP42898 RN7SL828P-201ENST00000607615 303 ntBASIC17.35■□□□□ 0.37
MTHFRP42898 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.35■□□□□ 0.37
MTHFRP42898 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.35■□□□□ 0.37
MTHFRP42898 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.35■□□□□ 0.37
MTHFRP42898 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.35■□□□□ 0.37
MTHFRP42898 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MTHFRP42898 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 AC099398.1-201ENST00000567919 2776 ntBASIC17.35■□□□□ 0.37
MTHFRP42898 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
MTHFRP42898 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
MTHFRP42898 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
MTHFRP42898 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.35■□□□□ 0.37
MTHFRP42898 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MTHFRP42898 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.35■□□□□ 0.37
MTHFRP42898 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
MTHFRP42898 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
MTHFRP42898 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
MTHFRP42898 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
MTHFRP42898 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MTHFRP42898 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MTHFRP42898 AC012317.2-201ENST00000623305 2251 ntBASIC17.35■□□□□ 0.37
MTHFRP42898 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.35■□□□□ 0.37
MTHFRP42898 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.35■□□□□ 0.37
MTHFRP42898 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.34■□□□□ 0.37
MTHFRP42898 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MTHFRP42898 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.34■□□□□ 0.37
MTHFRP42898 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MTHFRP42898 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MTHFRP42898 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MTHFRP42898 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
MTHFRP42898 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MTHFRP42898 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.34■□□□□ 0.37
MTHFRP42898 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.34■□□□□ 0.37
MTHFRP42898 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
MTHFRP42898 DFFBP1-201ENST00000433250 979 ntBASIC17.34■□□□□ 0.37
MTHFRP42898 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MTHFRP42898 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.34■□□□□ 0.37
MTHFRP42898 AL391825.1-201ENST00000457671 1364 ntBASIC17.34■□□□□ 0.37
MTHFRP42898 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.34■□□□□ 0.37
MTHFRP42898 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.34■□□□□ 0.37
MTHFRP42898 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.34■□□□□ 0.37
MTHFRP42898 AC133963.1-201ENST00000504166 1679 ntBASIC17.34■□□□□ 0.37
MTHFRP42898 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
MTHFRP42898 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.34■□□□□ 0.37
MTHFRP42898 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.34■□□□□ 0.37
MTHFRP42898 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.34■□□□□ 0.37
MTHFRP42898 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
MTHFRP42898 SPTSSB-204ENST00000617024 1292 ntBASIC17.34■□□□□ 0.37
MTHFRP42898 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
MTHFRP42898 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MTHFRP42898 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MTHFRP42898 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MTHFRP42898 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
MTHFRP42898 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MTHFRP42898 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.33■□□□□ 0.37
MTHFRP42898 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MTHFRP42898 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
MTHFRP42898 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
MTHFRP42898 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MTHFRP42898 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.33■□□□□ 0.37
MTHFRP42898 BTBD7P1-201ENST00000447253 1453 ntBASIC17.33■□□□□ 0.37
MTHFRP42898 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
MTHFRP42898 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MTHFRP42898 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
MTHFRP42898 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms