Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGCLP35914 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCLP35914 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGCLP35914 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HMGCLP35914 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.54■□□□□ 0.24
HMGCLP35914 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGCLP35914 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
HMGCLP35914 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCLP35914 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCLP35914 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCLP35914 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCLP35914 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HMGCLP35914 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HMGCLP35914 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCLP35914 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCLP35914 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HMGCLP35914 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGCLP35914 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HMGCLP35914 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCLP35914 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCLP35914 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.53■□□□□ 0.24
HMGCLP35914 AL355306.1-201ENST00000415580 579 ntBASIC16.53■□□□□ 0.24
HMGCLP35914 HTR5BP-201ENST00000430851 1154 ntBASIC16.53■□□□□ 0.24
HMGCLP35914 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.53■□□□□ 0.24
HMGCLP35914 FAM86C2P-203ENST00000528684 1004 ntBASIC16.53■□□□□ 0.24
HMGCLP35914 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.53■□□□□ 0.24
HMGCLP35914 AC005829.1-201ENST00000570002 483 ntBASIC16.53■□□□□ 0.24
HMGCLP35914 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HMGCLP35914 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.53■□□□□ 0.24
HMGCLP35914 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
HMGCLP35914 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGCLP35914 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGCLP35914 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCLP35914 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HMGCLP35914 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HMGCLP35914 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCLP35914 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGCLP35914 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCLP35914 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HMGCLP35914 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.53■□□□□ 0.24
HMGCLP35914 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCLP35914 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCLP35914 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HMGCLP35914 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCLP35914 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCLP35914 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCLP35914 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.52■□□□□ 0.24
HMGCLP35914 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCLP35914 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCLP35914 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.52■□□□□ 0.24
HMGCLP35914 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCLP35914 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.52■□□□□ 0.24
HMGCLP35914 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HMGCLP35914 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCLP35914 AC005052.1-201ENST00000625181 2492 ntBASIC16.52■□□□□ 0.24
HMGCLP35914 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCLP35914 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCLP35914 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HMGCLP35914 GPX1P2-201ENST00000429271 606 ntBASIC16.52■□□□□ 0.24
HMGCLP35914 AL671277.1-201ENST00000429656 993 ntBASIC16.52■□□□□ 0.24
HMGCLP35914 ADH5P3-201ENST00000433842 1137 ntBASIC16.52■□□□□ 0.24
HMGCLP35914 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCLP35914 ALG1L5P-201ENST00000482043 771 ntBASIC16.52■□□□□ 0.24
HMGCLP35914 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
HMGCLP35914 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCLP35914 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCLP35914 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGCLP35914 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HMGCLP35914 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HMGCLP35914 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.52■□□□□ 0.23
HMGCLP35914 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGCLP35914 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGCLP35914 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HMGCLP35914 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGCLP35914 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGCLP35914 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGCLP35914 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.51■□□□□ 0.23
HMGCLP35914 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
HMGCLP35914 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGCLP35914 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HMGCLP35914 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGCLP35914 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HMGCLP35914 ELL2P1-201ENST00000413990 1906 ntBASIC16.51■□□□□ 0.23
HMGCLP35914 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.51■□□□□ 0.23
HMGCLP35914 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCLP35914 RPSAP43-201ENST00000402237 625 ntBASIC16.51■□□□□ 0.23
HMGCLP35914 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.51■□□□□ 0.23
HMGCLP35914 UPF3AP3-201ENST00000420996 769 ntBASIC16.51■□□□□ 0.23
HMGCLP35914 POU5F1P6-201ENST00000466990 990 ntBASIC16.51■□□□□ 0.23
HMGCLP35914 YBX1P5-201ENST00000509441 847 ntBASIC16.51■□□□□ 0.23
HMGCLP35914 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.51■□□□□ 0.23
HMGCLP35914 MIR3687-2-201ENST00000577708 61 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms