Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.9■□□□□ 0.78
NCLP19338 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.9■□□□□ 0.78
NCLP19338 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.9■□□□□ 0.78
NCLP19338 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.9■□□□□ 0.78
NCLP19338 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
NCLP19338 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.9■□□□□ 0.78
NCLP19338 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NCLP19338 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.89■□□□□ 0.78
NCLP19338 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NCLP19338 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
NCLP19338 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
NCLP19338 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NCLP19338 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
NCLP19338 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCLP19338 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCLP19338 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCLP19338 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.89■□□□□ 0.77
NCLP19338 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.89■□□□□ 0.77
NCLP19338 AC122714.2-201ENST00000502787 707 ntBASIC19.89■□□□□ 0.77
NCLP19338 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.89■□□□□ 0.77
NCLP19338 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.89■□□□□ 0.77
NCLP19338 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.89■□□□□ 0.77
NCLP19338 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NCLP19338 ALOX12P2-203ENST00000570921 1945 ntBASIC19.89■□□□□ 0.77
NCLP19338 AC005336.2-201ENST00000593183 939 ntBASIC19.89■□□□□ 0.77
NCLP19338 AL135999.2-201ENST00000622438 1686 ntBASIC19.89■□□□□ 0.77
NCLP19338 AL136379.1-201ENST00000623471 2642 ntBASIC19.89■□□□□ 0.77
NCLP19338 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCLP19338 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC19.89■□□□□ 0.77
NCLP19338 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC19.89■□□□□ 0.77
NCLP19338 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCLP19338 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
NCLP19338 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
NCLP19338 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.89■□□□□ 0.77
NCLP19338 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCLP19338 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NCLP19338 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NCLP19338 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.88■□□□□ 0.77
NCLP19338 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.88■□□□□ 0.77
NCLP19338 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.88■□□□□ 0.77
NCLP19338 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.88■□□□□ 0.77
NCLP19338 FAM220CP-201ENST00000395253 831 ntBASIC19.88■□□□□ 0.77
NCLP19338 AC103564.2-201ENST00000432853 1299 ntBASIC19.88■□□□□ 0.77
NCLP19338 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NCLP19338 AC011840.4-201ENST00000578471 627 ntBASIC19.88■□□□□ 0.77
NCLP19338 STK25P1-201ENST00000585406 838 ntBASIC19.88■□□□□ 0.77
NCLP19338 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.88■□□□□ 0.77
NCLP19338 AL138831.2-201ENST00000606564 490 ntBASIC19.88■□□□□ 0.77
NCLP19338 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.88■□□□□ 0.77
NCLP19338 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.88■□□□□ 0.77
NCLP19338 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
NCLP19338 AC024909.3-201ENST00000611513 2257 ntBASIC19.88■□□□□ 0.77
NCLP19338 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC19.88■□□□□ 0.77
NCLP19338 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
NCLP19338 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCLP19338 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NCLP19338 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NCLP19338 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.87■□□□□ 0.77
NCLP19338 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NCLP19338 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NCLP19338 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC19.87■□□□□ 0.77
NCLP19338 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NCLP19338 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NCLP19338 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.87■□□□□ 0.77
NCLP19338 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NCLP19338 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NCLP19338 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.87■□□□□ 0.77
NCLP19338 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
NCLP19338 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NCLP19338 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.87■□□□□ 0.77
NCLP19338 STK19B-204ENST00000512515 211 ntBASIC19.87■□□□□ 0.77
NCLP19338 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.87■□□□□ 0.77
NCLP19338 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.87■□□□□ 0.77
NCLP19338 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NCLP19338 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.87■□□□□ 0.77
NCLP19338 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms