Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.64■□□□□ 0.25
XRCC1P18887 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.64■□□□□ 0.25
XRCC1P18887 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
XRCC1P18887 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.64■□□□□ 0.25
XRCC1P18887 AC087163.2-201ENST00000457299 853 ntBASIC16.64■□□□□ 0.25
XRCC1P18887 CXCL1P1-201ENST00000502804 216 ntBASIC16.64■□□□□ 0.25
XRCC1P18887 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC1P18887 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.64■□□□□ 0.25
XRCC1P18887 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.64■□□□□ 0.25
XRCC1P18887 AC018845.2-201ENST00000568326 409 ntBASIC16.64■□□□□ 0.25
XRCC1P18887 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.64■□□□□ 0.25
XRCC1P18887 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.64■□□□□ 0.25
XRCC1P18887 AC139530.3-201ENST00000620344 690 ntBASIC16.64■□□□□ 0.25
XRCC1P18887 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.64■□□□□ 0.25
XRCC1P18887 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.64■□□□□ 0.25
XRCC1P18887 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC1P18887 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
XRCC1P18887 AC129492.6-201ENST00000611383 1305 ntBASIC16.64■□□□□ 0.25
XRCC1P18887 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
XRCC1P18887 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC1P18887 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC1P18887 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC1P18887 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
XRCC1P18887 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.64■□□□□ 0.25
XRCC1P18887 AL513523.2-202ENST00000427283 2040 ntBASIC16.63■□□□□ 0.25
XRCC1P18887 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
XRCC1P18887 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC1P18887 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC1P18887 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.63■□□□□ 0.25
XRCC1P18887 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
XRCC1P18887 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.63■□□□□ 0.25
XRCC1P18887 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
XRCC1P18887 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.63■□□□□ 0.25
XRCC1P18887 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
XRCC1P18887 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.63■□□□□ 0.25
XRCC1P18887 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC1P18887 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.63■□□□□ 0.25
XRCC1P18887 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
XRCC1P18887 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC1P18887 RPSAP43-201ENST00000402237 625 ntBASIC16.63■□□□□ 0.25
XRCC1P18887 FAM185BP-201ENST00000443595 716 ntBASIC16.63■□□□□ 0.25
XRCC1P18887 SLC25A6P2-201ENST00000497974 877 ntBASIC16.63■□□□□ 0.25
XRCC1P18887 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.63■□□□□ 0.25
XRCC1P18887 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.63■□□□□ 0.25
XRCC1P18887 MIR3687-2-201ENST00000577708 61 ntBASIC16.63■□□□□ 0.25
XRCC1P18887 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
XRCC1P18887 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.63■□□□□ 0.25
XRCC1P18887 MIR3687-1-201ENST00000614492 61 ntBASIC16.63■□□□□ 0.25
XRCC1P18887 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.63■□□□□ 0.25
XRCC1P18887 AC010507.1-201ENST00000633895 436 ntBASIC16.63■□□□□ 0.25
XRCC1P18887 AC007064.4-201ENST00000637740 555 ntBASIC16.63■□□□□ 0.25
XRCC1P18887 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.63■□□□□ 0.25
XRCC1P18887 AC092865.6-201ENST00000642101 219 ntBASIC16.63■□□□□ 0.25
XRCC1P18887 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC1P18887 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC1P18887 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC1P18887 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC1P18887 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC1P18887 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC1P18887 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC1P18887 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.63■□□□□ 0.25
XRCC1P18887 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC1P18887 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
XRCC1P18887 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC1P18887 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 AC022188.1-201ENST00000620960 1664 ntBASIC16.62■□□□□ 0.25
XRCC1P18887 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 AC093525.9-201ENST00000624961 1746 ntBASIC16.62■□□□□ 0.25
XRCC1P18887 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.62■□□□□ 0.25
XRCC1P18887 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.62■□□□□ 0.25
XRCC1P18887 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.62■□□□□ 0.25
XRCC1P18887 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.62■□□□□ 0.25
XRCC1P18887 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
XRCC1P18887 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.62■□□□□ 0.25
XRCC1P18887 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 MIR1233-2-201ENST00000408138 82 ntBASIC16.62■□□□□ 0.25
XRCC1P18887 MIR1233-1-201ENST00000408722 82 ntBASIC16.62■□□□□ 0.25
XRCC1P18887 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 GPX1P2-201ENST00000429271 606 ntBASIC16.62■□□□□ 0.25
XRCC1P18887 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.62■□□□□ 0.25
XRCC1P18887 AC112482.1-201ENST00000492080 688 ntBASIC16.62■□□□□ 0.25
XRCC1P18887 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.62■□□□□ 0.25
XRCC1P18887 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
XRCC1P18887 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 AC004877.2-201ENST00000623941 599 ntBASIC16.62■□□□□ 0.25
XRCC1P18887 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.62■□□□□ 0.25
XRCC1P18887 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.62■□□□□ 0.25
XRCC1P18887 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC1P18887 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms