Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.16□□□□□ -0.14
HIST1H1DP16402 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H1DP16402 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HIST1H1DP16402 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H1DP16402 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H1DP16402 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST1H1DP16402 AC211429.1-201ENST00000415277 523 ntBASIC14.16□□□□□ -0.14
HIST1H1DP16402 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 POM121L3P-201ENST00000419331 1163 ntBASIC14.16□□□□□ -0.14
HIST1H1DP16402 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H1DP16402 IGHV3-47-201ENST00000425060 335 ntBASIC14.16□□□□□ -0.14
HIST1H1DP16402 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H1DP16402 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H1DP16402 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST1H1DP16402 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HIST1H1DP16402 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HIST1H1DP16402 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST1H1DP16402 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
HIST1H1DP16402 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1DP16402 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 AC005332.1-201ENST00000577698 1310 ntBASIC14.15□□□□□ -0.14
HIST1H1DP16402 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 KRT8P39-201ENST00000396270 1433 ntBASIC14.15□□□□□ -0.14
HIST1H1DP16402 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 AC126177.1-201ENST00000547829 2218 ntBASIC14.15□□□□□ -0.14
HIST1H1DP16402 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 POU5F1P6-201ENST00000466990 990 ntBASIC14.15□□□□□ -0.14
HIST1H1DP16402 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 MPDU1-223ENST00000582151 728 ntBASIC14.15□□□□□ -0.14
HIST1H1DP16402 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1DP16402 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HIST1H1DP16402 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
HIST1H1DP16402 AC063926.3-201ENST00000624734 5658 ntBASIC14.15□□□□□ -0.15
HIST1H1DP16402 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
HIST1H1DP16402 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H1DP16402 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms