Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
NCK1P16333 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NCK1P16333 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NCK1P16333 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.78■□□□□ 0.12
NCK1P16333 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NCK1P16333 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NCK1P16333 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NCK1P16333 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NCK1P16333 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NCK1P16333 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.78■□□□□ 0.12
NCK1P16333 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NCK1P16333 VENTXP7-201ENST00000475503 772 ntBASIC15.78■□□□□ 0.12
NCK1P16333 AC063952.2-201ENST00000498792 1227 ntBASIC15.78■□□□□ 0.12
NCK1P16333 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.78■□□□□ 0.12
NCK1P16333 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.78■□□□□ 0.12
NCK1P16333 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.78■□□□□ 0.12
NCK1P16333 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.78■□□□□ 0.12
NCK1P16333 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NCK1P16333 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.78■□□□□ 0.12
NCK1P16333 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
NCK1P16333 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
NCK1P16333 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NCK1P16333 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
NCK1P16333 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.78■□□□□ 0.12
NCK1P16333 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NCK1P16333 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NCK1P16333 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NCK1P16333 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NCK1P16333 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.78■□□□□ 0.12
NCK1P16333 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NCK1P16333 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NCK1P16333 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
NCK1P16333 AL512652.2-201ENST00000625156 1716 ntBASIC15.77■□□□□ 0.12
NCK1P16333 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.77■□□□□ 0.12
NCK1P16333 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NCK1P16333 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
NCK1P16333 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.77■□□□□ 0.12
NCK1P16333 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCK1P16333 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCK1P16333 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCK1P16333 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NCK1P16333 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
NCK1P16333 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCK1P16333 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCK1P16333 SPDYE21P-201ENST00000413323 827 ntBASIC15.77■□□□□ 0.12
NCK1P16333 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
NCK1P16333 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.77■□□□□ 0.12
NCK1P16333 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.77■□□□□ 0.12
NCK1P16333 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
NCK1P16333 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NCK1P16333 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.77■□□□□ 0.12
NCK1P16333 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.77■□□□□ 0.12
NCK1P16333 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NCK1P16333 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCK1P16333 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.77■□□□□ 0.11
NCK1P16333 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
NCK1P16333 MST1L-201ENST00000442552 2185 ntBASIC15.77■□□□□ 0.11
NCK1P16333 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.77■□□□□ 0.11
NCK1P16333 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NCK1P16333 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.77■□□□□ 0.11
NCK1P16333 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
NCK1P16333 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
NCK1P16333 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NCK1P16333 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NCK1P16333 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
NCK1P16333 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NCK1P16333 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
NCK1P16333 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NCK1P16333 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.77■□□□□ 0.11
NCK1P16333 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
NCK1P16333 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
NCK1P16333 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
NCK1P16333 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.77■□□□□ 0.11
NCK1P16333 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.77■□□□□ 0.11
NCK1P16333 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.76■□□□□ 0.11
NCK1P16333 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NCK1P16333 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 REXO1L8P-201ENST00000604378 1897 ntBASIC15.76■□□□□ 0.11
NCK1P16333 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.76■□□□□ 0.11
NCK1P16333 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.76■□□□□ 0.11
NCK1P16333 AL031731.1-201ENST00000642131 2094 ntBASIC15.76■□□□□ 0.11
NCK1P16333 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
NCK1P16333 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.76■□□□□ 0.11
NCK1P16333 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.76■□□□□ 0.11
NCK1P16333 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.76■□□□□ 0.11
NCK1P16333 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCK1P16333 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.76■□□□□ 0.11
NCK1P16333 AC096582.2-201ENST00000510860 516 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms