Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.46■□□□□ 0.39
PDGFRAP16234 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
PDGFRAP16234 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.46■□□□□ 0.39
PDGFRAP16234 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.46■□□□□ 0.39
PDGFRAP16234 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.46■□□□□ 0.39
PDGFRAP16234 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.46■□□□□ 0.39
PDGFRAP16234 AC002347.1-201ENST00000569543 541 ntBASIC17.46■□□□□ 0.39
PDGFRAP16234 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.46■□□□□ 0.39
PDGFRAP16234 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
PDGFRAP16234 AC004877.2-201ENST00000623941 599 ntBASIC17.46■□□□□ 0.39
PDGFRAP16234 AC092865.6-201ENST00000642101 219 ntBASIC17.46■□□□□ 0.39
PDGFRAP16234 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PDGFRAP16234 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PDGFRAP16234 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFRAP16234 AC025580.3-201ENST00000617932 1424 ntBASIC17.46■□□□□ 0.39
PDGFRAP16234 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.46■□□□□ 0.39
PDGFRAP16234 BCAR1-209ENST00000546196 1340 ntBASIC17.46■□□□□ 0.38
PDGFRAP16234 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
PDGFRAP16234 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PDGFRAP16234 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.45■□□□□ 0.38
PDGFRAP16234 AC005052.1-201ENST00000625181 2492 ntBASIC17.45■□□□□ 0.38
PDGFRAP16234 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.45■□□□□ 0.38
PDGFRAP16234 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.45■□□□□ 0.38
PDGFRAP16234 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.45■□□□□ 0.38
PDGFRAP16234 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 RNU1-129P-201ENST00000384064 167 ntBASIC17.45■□□□□ 0.38
PDGFRAP16234 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PDGFRAP16234 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.45■□□□□ 0.38
PDGFRAP16234 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PDGFRAP16234 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.45■□□□□ 0.38
PDGFRAP16234 U1.21-201ENST00000580816 167 ntBASIC17.45■□□□□ 0.38
PDGFRAP16234 AL513190.1-201ENST00000621254 727 ntBASIC17.45■□□□□ 0.38
PDGFRAP16234 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.45■□□□□ 0.38
PDGFRAP16234 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.45■□□□□ 0.38
PDGFRAP16234 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.45■□□□□ 0.38
PDGFRAP16234 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PDGFRAP16234 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PDGFRAP16234 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.45■□□□□ 0.38
PDGFRAP16234 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDGFRAP16234 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PDGFRAP16234 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.44■□□□□ 0.38
PDGFRAP16234 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
PDGFRAP16234 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PDGFRAP16234 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.44■□□□□ 0.38
PDGFRAP16234 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.44■□□□□ 0.38
PDGFRAP16234 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 GPAA1P2-202ENST00000606848 1787 ntBASIC17.44■□□□□ 0.38
PDGFRAP16234 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.44■□□□□ 0.38
PDGFRAP16234 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.44■□□□□ 0.38
PDGFRAP16234 YBX2P1-201ENST00000394192 760 ntBASIC17.44■□□□□ 0.38
PDGFRAP16234 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.44■□□□□ 0.38
PDGFRAP16234 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.44■□□□□ 0.38
PDGFRAP16234 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.44■□□□□ 0.38
PDGFRAP16234 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.44■□□□□ 0.38
PDGFRAP16234 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PDGFRAP16234 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PDGFRAP16234 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PDGFRAP16234 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PDGFRAP16234 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PDGFRAP16234 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.44■□□□□ 0.38
PDGFRAP16234 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms