Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC130P13994 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC130P13994 SPDYE9P-201ENST00000570642 692 ntBASIC17.61■□□□□ 0.41
CCDC130P13994 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC130P13994 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC130P13994 AC022145.2-201ENST00000598203 171 ntBASIC17.61■□□□□ 0.41
CCDC130P13994 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC130P13994 SPDYE10P-202ENST00000612005 668 ntBASIC17.61■□□□□ 0.41
CCDC130P13994 SPDYE8P-202ENST00000612377 668 ntBASIC17.61■□□□□ 0.41
CCDC130P13994 AL513210.1-201ENST00000629608 234 ntBASIC17.61■□□□□ 0.41
CCDC130P13994 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC130P13994 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CCDC130P13994 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC130P13994 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC130P13994 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC130P13994 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC130P13994 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC130P13994 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC130P13994 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC130P13994 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC130P13994 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC130P13994 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CCDC130P13994 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC130P13994 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC130P13994 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC130P13994 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC130P13994 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC130P13994 AC004461.1-201ENST00000412461 403 ntBASIC17.6■□□□□ 0.41
CCDC130P13994 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC130P13994 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CCDC130P13994 HLA-J-202ENST00000469281 1241 ntBASIC17.6■□□□□ 0.41
CCDC130P13994 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC130P13994 AC079140.1-201ENST00000508039 487 ntBASIC17.6■□□□□ 0.41
CCDC130P13994 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.6■□□□□ 0.41
CCDC130P13994 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC130P13994 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC130P13994 AC243562.1-201ENST00000560672 389 ntBASIC17.6■□□□□ 0.41
CCDC130P13994 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC130P13994 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC130P13994 AP001160.2-201ENST00000596071 487 ntBASIC17.6■□□□□ 0.41
CCDC130P13994 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC130P13994 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC130P13994 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC130P13994 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC130P13994 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC130P13994 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC130P13994 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC130P13994 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CCDC130P13994 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC130P13994 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC130P13994 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC130P13994 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC130P13994 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC130P13994 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC130P13994 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC130P13994 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC130P13994 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CCDC130P13994 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC130P13994 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC130P13994 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC130P13994 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC130P13994 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC130P13994 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC130P13994 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC130P13994 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
CCDC130P13994 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC130P13994 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC130P13994 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCDC130P13994 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
CCDC130P13994 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CCDC130P13994 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC130P13994 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC130P13994 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC130P13994 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC130P13994 AKAP8P1-201ENST00000434743 1349 ntBASIC17.59■□□□□ 0.41
CCDC130P13994 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC130P13994 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC130P13994 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC130P13994 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC130P13994 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC130P13994 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC130P13994 AC254562.1-201ENST00000417586 456 ntBASIC17.59■□□□□ 0.41
CCDC130P13994 FAM86C2P-203ENST00000528684 1004 ntBASIC17.59■□□□□ 0.41
CCDC130P13994 SNHG9-202ENST00000564014 471 ntBASIC17.59■□□□□ 0.41
CCDC130P13994 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC130P13994 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC130P13994 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC130P13994 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC130P13994 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC130P13994 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC130P13994 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms