Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CALM3P0DP25 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.28■□□□□ 0.68
CALM3P0DP25 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CALM3P0DP25 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
CALM3P0DP25 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
CALM3P0DP25 CEND1P1-201ENST00000451006 455 ntBASIC19.28■□□□□ 0.68
CALM3P0DP25 POU5F1P6-201ENST00000466990 990 ntBASIC19.28■□□□□ 0.68
CALM3P0DP25 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CALM3P0DP25 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CALM3P0DP25 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
CALM3P0DP25 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.28■□□□□ 0.68
CALM3P0DP25 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 AC026120.1-201ENST00000611536 926 ntBASIC19.28■□□□□ 0.68
CALM3P0DP25 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CALM3P0DP25 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.28■□□□□ 0.68
CALM3P0DP25 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.28■□□□□ 0.68
CALM3P0DP25 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.28■□□□□ 0.68
CALM3P0DP25 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CALM3P0DP25 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.28■□□□□ 0.68
CALM3P0DP25 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CALM3P0DP25 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.27■□□□□ 0.68
CALM3P0DP25 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.27■□□□□ 0.68
CALM3P0DP25 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CALM3P0DP25 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.27■□□□□ 0.68
CALM3P0DP25 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.27■□□□□ 0.68
CALM3P0DP25 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
CALM3P0DP25 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
CALM3P0DP25 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CALM3P0DP25 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.27■□□□□ 0.68
CALM3P0DP25 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CALM3P0DP25 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CALM3P0DP25 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.27■□□□□ 0.68
CALM3P0DP25 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.27■□□□□ 0.68
CALM3P0DP25 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.27■□□□□ 0.68
CALM3P0DP25 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.27■□□□□ 0.68
CALM3P0DP25 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
CALM3P0DP25 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.27■□□□□ 0.68
CALM3P0DP25 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.27■□□□□ 0.68
CALM3P0DP25 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.27■□□□□ 0.68
CALM3P0DP25 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.27■□□□□ 0.68
CALM3P0DP25 MIR4469-201ENST00000583919 79 ntBASIC19.27■□□□□ 0.68
CALM3P0DP25 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.27■□□□□ 0.68
CALM3P0DP25 AC023511.2-201ENST00000618803 211 ntBASIC19.27■□□□□ 0.68
CALM3P0DP25 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CALM3P0DP25 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
CALM3P0DP25 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.27■□□□□ 0.68
CALM3P0DP25 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CALM3P0DP25 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CALM3P0DP25 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CALM3P0DP25 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CALM3P0DP25 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.27■□□□□ 0.68
CALM3P0DP25 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CALM3P0DP25 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
CALM3P0DP25 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CALM3P0DP25 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CALM3P0DP25 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.27■□□□□ 0.67
CALM3P0DP25 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CALM3P0DP25 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CALM3P0DP25 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CALM3P0DP25 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CALM3P0DP25 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CALM3P0DP25 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CALM3P0DP25 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.26■□□□□ 0.67
CALM3P0DP25 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CALM3P0DP25 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CALM3P0DP25 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CALM3P0DP25 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CALM3P0DP25 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CALM3P0DP25 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.26■□□□□ 0.67
CALM3P0DP25 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CALM3P0DP25 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CALM3P0DP25 SPDYE11-202ENST00000450699 704 ntBASIC19.26■□□□□ 0.67
CALM3P0DP25 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CALM3P0DP25 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.26■□□□□ 0.67
CALM3P0DP25 SPDYE9P-201ENST00000570642 692 ntBASIC19.26■□□□□ 0.67
CALM3P0DP25 SPDYE10P-202ENST00000612005 668 ntBASIC19.26■□□□□ 0.67
CALM3P0DP25 SPDYE8P-202ENST00000612377 668 ntBASIC19.26■□□□□ 0.67
CALM3P0DP25 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.26■□□□□ 0.67
CALM3P0DP25 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CALM3P0DP25 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CALM3P0DP25 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CALM3P0DP25 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.26■□□□□ 0.67
CALM3P0DP25 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CALM3P0DP25 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms