Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.56□□□□□ -0.08
SFTPBP07988 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.55□□□□□ -0.08
SFTPBP07988 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.55□□□□□ -0.08
SFTPBP07988 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.55□□□□□ -0.08
SFTPBP07988 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.55□□□□□ -0.08
SFTPBP07988 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.55□□□□□ -0.08
SFTPBP07988 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
SFTPBP07988 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.55□□□□□ -0.08
SFTPBP07988 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.55□□□□□ -0.08
SFTPBP07988 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.55□□□□□ -0.08
SFTPBP07988 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.55□□□□□ -0.08
SFTPBP07988 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.55□□□□□ -0.08
SFTPBP07988 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SFTPBP07988 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.55□□□□□ -0.08
SFTPBP07988 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.55□□□□□ -0.08
SFTPBP07988 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.55□□□□□ -0.08
SFTPBP07988 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTPBP07988 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SFTPBP07988 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SFTPBP07988 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SFTPBP07988 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SFTPBP07988 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SFTPBP07988 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.54□□□□□ -0.08
SFTPBP07988 ACTG1P4-201ENST00000425123 1122 ntBASIC14.54□□□□□ -0.08
SFTPBP07988 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.54□□□□□ -0.08
SFTPBP07988 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.54□□□□□ -0.08
SFTPBP07988 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.54□□□□□ -0.08
SFTPBP07988 SLC25A6P4-201ENST00000586535 553 ntBASIC14.54□□□□□ -0.08
SFTPBP07988 MTDHP3-201ENST00000594186 672 ntBASIC14.54□□□□□ -0.08
SFTPBP07988 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.54□□□□□ -0.08
SFTPBP07988 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.54□□□□□ -0.08
SFTPBP07988 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.54□□□□□ -0.08
SFTPBP07988 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SFTPBP07988 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.54□□□□□ -0.08
SFTPBP07988 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.54□□□□□ -0.08
SFTPBP07988 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.54□□□□□ -0.08
SFTPBP07988 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.54□□□□□ -0.08
SFTPBP07988 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SFTPBP07988 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SFTPBP07988 AC004817.3-201ENST00000602957 2129 ntBASIC14.54□□□□□ -0.08
SFTPBP07988 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.54□□□□□ -0.08
SFTPBP07988 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.54□□□□□ -0.08
SFTPBP07988 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTPBP07988 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.54□□□□□ -0.08
SFTPBP07988 AC092850.2-201ENST00000623821 2697 ntBASIC14.54□□□□□ -0.08
SFTPBP07988 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.53□□□□□ -0.08
SFTPBP07988 AC132872.4-202ENST00000622924 2756 ntBASIC14.53□□□□□ -0.08
SFTPBP07988 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SFTPBP07988 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.53□□□□□ -0.08
SFTPBP07988 AC097637.2-201ENST00000624096 1997 ntBASIC14.53□□□□□ -0.08
SFTPBP07988 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.53□□□□□ -0.08
SFTPBP07988 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.53□□□□□ -0.08
SFTPBP07988 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SFTPBP07988 SIGLEC16-201ENST00000599858 1437 ntBASIC14.53□□□□□ -0.08
SFTPBP07988 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms