Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPM2P07951 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
TPM2P07951 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM2P07951 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TPM2P07951 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
TPM2P07951 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.02■□□□□ 0.64
TPM2P07951 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.02■□□□□ 0.64
TPM2P07951 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.02■□□□□ 0.64
TPM2P07951 RN7SL606P-201ENST00000472779 293 ntBASIC19.02■□□□□ 0.64
TPM2P07951 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.02■□□□□ 0.64
TPM2P07951 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.02■□□□□ 0.64
TPM2P07951 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM2P07951 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM2P07951 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.02■□□□□ 0.64
TPM2P07951 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM2P07951 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPM2P07951 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC19.02■□□□□ 0.64
TPM2P07951 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TPM2P07951 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TPM2P07951 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TPM2P07951 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.02■□□□□ 0.63
TPM2P07951 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.02■□□□□ 0.63
TPM2P07951 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC19.02■□□□□ 0.63
TPM2P07951 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TPM2P07951 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.01■□□□□ 0.63
TPM2P07951 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TPM2P07951 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.01■□□□□ 0.63
TPM2P07951 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 SLC25A1P3-201ENST00000395415 828 ntBASIC19.01■□□□□ 0.63
TPM2P07951 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TPM2P07951 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TPM2P07951 SPDYE13P-201ENST00000445314 798 ntBASIC19.01■□□□□ 0.63
TPM2P07951 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.01■□□□□ 0.63
TPM2P07951 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.01■□□□□ 0.63
TPM2P07951 AL138831.2-201ENST00000606564 490 ntBASIC19.01■□□□□ 0.63
TPM2P07951 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TPM2P07951 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TPM2P07951 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC19.01■□□□□ 0.63
TPM2P07951 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM2P07951 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 AL137784.3-201ENST00000623858 2288 ntBASIC19■□□□□ 0.63
TPM2P07951 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19■□□□□ 0.63
TPM2P07951 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19■□□□□ 0.63
TPM2P07951 NID2-208ENST00000617139 3827 ntTSL 5 BASIC19■□□□□ 0.63
TPM2P07951 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19■□□□□ 0.63
TPM2P07951 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19■□□□□ 0.63
TPM2P07951 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TPM2P07951 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19■□□□□ 0.63
TPM2P07951 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TPM2P07951 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19■□□□□ 0.63
TPM2P07951 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 AC011498.5-201ENST00000592027 486 ntBASIC19■□□□□ 0.63
TPM2P07951 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TPM2P07951 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
TPM2P07951 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19■□□□□ 0.63
TPM2P07951 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
TPM2P07951 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 AC023908.3-201ENST00000564211 3047 ntBASIC19■□□□□ 0.63
TPM2P07951 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC19■□□□□ 0.63
TPM2P07951 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TPM2P07951 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM2P07951 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19■□□□□ 0.63
TPM2P07951 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TPM2P07951 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.99■□□□□ 0.63
TPM2P07951 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.99■□□□□ 0.63
TPM2P07951 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 EGFEM1P-202ENST00000431685 1563 ntBASIC18.99■□□□□ 0.63
TPM2P07951 AL049757.1-201ENST00000616842 1596 ntBASIC18.99■□□□□ 0.63
TPM2P07951 MTHFR-217ENST00000641820 1569 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms