Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN1P07384 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.44■□□□□ 0.22
CAPN1P07384 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CAPN1P07384 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.44■□□□□ 0.22
CAPN1P07384 AC108751.1-201ENST00000490852 363 ntBASIC16.44■□□□□ 0.22
CAPN1P07384 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.44■□□□□ 0.22
CAPN1P07384 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.44■□□□□ 0.22
CAPN1P07384 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.44■□□□□ 0.22
CAPN1P07384 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.44■□□□□ 0.22
CAPN1P07384 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN1P07384 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN1P07384 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN1P07384 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
CAPN1P07384 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN1P07384 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN1P07384 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN1P07384 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN1P07384 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.43■□□□□ 0.22
CAPN1P07384 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
CAPN1P07384 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CAPN1P07384 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.43■□□□□ 0.22
CAPN1P07384 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.43■□□□□ 0.22
CAPN1P07384 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CAPN1P07384 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.43■□□□□ 0.22
CAPN1P07384 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CAPN1P07384 MIR1233-2-201ENST00000408138 82 ntBASIC16.43■□□□□ 0.22
CAPN1P07384 MIR1233-1-201ENST00000408722 82 ntBASIC16.43■□□□□ 0.22
CAPN1P07384 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
CAPN1P07384 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.43■□□□□ 0.22
CAPN1P07384 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.43■□□□□ 0.22
CAPN1P07384 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.43■□□□□ 0.22
CAPN1P07384 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.43■□□□□ 0.22
CAPN1P07384 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.43■□□□□ 0.22
CAPN1P07384 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.43■□□□□ 0.22
CAPN1P07384 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CAPN1P07384 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.43■□□□□ 0.22
CAPN1P07384 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.43■□□□□ 0.22
CAPN1P07384 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CAPN1P07384 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CAPN1P07384 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
CAPN1P07384 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.43■□□□□ 0.22
CAPN1P07384 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CAPN1P07384 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CAPN1P07384 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.43■□□□□ 0.22
CAPN1P07384 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
CAPN1P07384 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.43■□□□□ 0.22
CAPN1P07384 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN1P07384 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.43■□□□□ 0.22
CAPN1P07384 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN1P07384 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.42■□□□□ 0.22
CAPN1P07384 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN1P07384 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.42■□□□□ 0.22
CAPN1P07384 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN1P07384 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.42■□□□□ 0.22
CAPN1P07384 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN1P07384 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN1P07384 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CAPN1P07384 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN1P07384 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CAPN1P07384 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN1P07384 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.42■□□□□ 0.22
CAPN1P07384 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN1P07384 RNA5SP416-201ENST00000516838 111 ntBASIC16.42■□□□□ 0.22
CAPN1P07384 AC040169.1-201ENST00000565382 521 ntBASIC16.42■□□□□ 0.22
CAPN1P07384 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.42■□□□□ 0.22
CAPN1P07384 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CAPN1P07384 AC055717.3-201ENST00000622967 595 ntBASIC16.42■□□□□ 0.22
CAPN1P07384 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.42■□□□□ 0.22
CAPN1P07384 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.42■□□□□ 0.22
CAPN1P07384 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN1P07384 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN1P07384 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
CAPN1P07384 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN1P07384 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN1P07384 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN1P07384 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN1P07384 FLJ16779-201ENST00000612722 7638 ntBASIC16.42■□□□□ 0.22
CAPN1P07384 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CAPN1P07384 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN1P07384 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN1P07384 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms