Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
P04436 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.19■□□□□ 0.02
P04436 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
P04436 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
P04436 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.18■□□□□ 0.02
P04436 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
P04436 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
P04436 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.18■□□□□ 0.02
P04436 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 AL645728.1-201ENST00000366221 2101 ntBASIC15.18■□□□□ 0.02
P04436 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.18■□□□□ 0.02
P04436 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.18■□□□□ 0.02
P04436 AL645939.2-201ENST00000427340 991 ntBASIC15.18■□□□□ 0.02
P04436 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 AC069335.1-201ENST00000489972 472 ntBASIC15.18■□□□□ 0.02
P04436 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.18■□□□□ 0.02
P04436 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.18■□□□□ 0.02
P04436 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.18■□□□□ 0.02
P04436 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.18■□□□□ 0.02
P04436 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.18■□□□□ 0.02
P04436 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.18■□□□□ 0.02
P04436 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.18■□□□□ 0.02
P04436 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
P04436 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.18■□□□□ 0.02
P04436 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
P04436 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.18■□□□□ 0.02
P04436 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.18■□□□□ 0.02
P04436 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
P04436 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
P04436 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04436 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
P04436 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.17■□□□□ 0.02
P04436 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
P04436 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 FLJ16779-201ENST00000612722 7638 ntBASIC15.17■□□□□ 0.02
P04436 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.17■□□□□ 0.02
P04436 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
P04436 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
P04436 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.17■□□□□ 0.02
P04436 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.17■□□□□ 0.02
P04436 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
P04436 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
P04436 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.17■□□□□ 0.02
P04436 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.17■□□□□ 0.02
P04436 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.17■□□□□ 0.02
P04436 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
P04436 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 HLA-J-203ENST00000494367 1087 ntBASIC15.17■□□□□ 0.02
P04436 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.17■□□□□ 0.02
P04436 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.17■□□□□ 0.02
P04436 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.17■□□□□ 0.02
P04436 AC093520.2-201ENST00000561830 333 ntBASIC15.17■□□□□ 0.02
P04436 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.17■□□□□ 0.02
P04436 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.17■□□□□ 0.02
P04436 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.17■□□□□ 0.02
P04436 AC093028.1-201ENST00000622998 982 ntBASIC15.17■□□□□ 0.02
P04436 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.17■□□□□ 0.02
P04436 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
P04436 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.17■□□□□ 0.02
P04436 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
P04436 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms