Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
IFNA1P01562 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
IFNA1P01562 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.22□□□□□ -0.29
IFNA1P01562 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 AL731571.1-201ENST00000617058 5428 ntBASIC13.22□□□□□ -0.29
IFNA1P01562 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
IFNA1P01562 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
IFNA1P01562 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
IFNA1P01562 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
IFNA1P01562 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
IFNA1P01562 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IFNA1P01562 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.21□□□□□ -0.29
IFNA1P01562 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.21□□□□□ -0.29
IFNA1P01562 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.21□□□□□ -0.29
IFNA1P01562 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IFNA1P01562 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IFNA1P01562 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFNA1P01562 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IFNA1P01562 LINC00895-201ENST00000629028 1637 ntBASIC13.21□□□□□ -0.29
IFNA1P01562 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFNA1P01562 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.21□□□□□ -0.29
IFNA1P01562 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
IFNA1P01562 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IFNA1P01562 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFNA1P01562 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IFNA1P01562 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
IFNA1P01562 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFNA1P01562 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFNA1P01562 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.21□□□□□ -0.29
IFNA1P01562 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.21□□□□□ -0.29
IFNA1P01562 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
IFNA1P01562 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.21□□□□□ -0.29
IFNA1P01562 AC111152.3-201ENST00000569699 673 ntBASIC13.21□□□□□ -0.29
IFNA1P01562 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.21□□□□□ -0.29
IFNA1P01562 AL023803.3-201ENST00000615559 522 ntBASIC13.21□□□□□ -0.29
IFNA1P01562 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IFNA1P01562 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
IFNA1P01562 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.21□□□□□ -0.29
IFNA1P01562 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
IFNA1P01562 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.21□□□□□ -0.29
IFNA1P01562 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.21□□□□□ -0.29
IFNA1P01562 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.21□□□□□ -0.29
IFNA1P01562 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.21□□□□□ -0.29
IFNA1P01562 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
IFNA1P01562 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
IFNA1P01562 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
IFNA1P01562 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
IFNA1P01562 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
IFNA1P01562 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
IFNA1P01562 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
IFNA1P01562 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.21□□□□□ -0.3
IFNA1P01562 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
IFNA1P01562 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
IFNA1P01562 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
IFNA1P01562 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
IFNA1P01562 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
IFNA1P01562 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.2□□□□□ -0.3
IFNA1P01562 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 AL021920.2-201ENST00000624828 1351 ntBASIC13.2□□□□□ -0.3
IFNA1P01562 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.2□□□□□ -0.3
IFNA1P01562 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.2□□□□□ -0.3
IFNA1P01562 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.2□□□□□ -0.3
IFNA1P01562 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.2□□□□□ -0.3
IFNA1P01562 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
IFNA1P01562 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
IFNA1P01562 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
IFNA1P01562 PEG13-201ENST00000631594 5667 ntBASIC13.2□□□□□ -0.3
IFNA1P01562 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
IFNA1P01562 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
IFNA1P01562 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
IFNA1P01562 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.2□□□□□ -0.3
IFNA1P01562 FAM197Y1-201ENST00000421178 764 ntBASIC13.2□□□□□ -0.3
IFNA1P01562 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
IFNA1P01562 AC116562.2-201ENST00000507042 360 ntBASIC13.2□□□□□ -0.3
IFNA1P01562 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.2□□□□□ -0.3
IFNA1P01562 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.2□□□□□ -0.3
IFNA1P01562 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.2□□□□□ -0.3
IFNA1P01562 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.2□□□□□ -0.3
IFNA1P01562 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
IFNA1P01562 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
IFNA1P01562 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms