Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLSTN1O94985 GPR89P-201ENST00000407924 1495 ntBASIC18.51■□□□□ 0.55
CLSTN1O94985 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.51■□□□□ 0.55
CLSTN1O94985 AC106886.4-201ENST00000623557 2502 ntBASIC18.51■□□□□ 0.55
CLSTN1O94985 AC006504.4-201ENST00000592118 1568 ntBASIC18.51■□□□□ 0.55
CLSTN1O94985 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLSTN1O94985 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CLSTN1O94985 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
CLSTN1O94985 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.5■□□□□ 0.55
CLSTN1O94985 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.5■□□□□ 0.55
CLSTN1O94985 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLSTN1O94985 AL353135.1-201ENST00000606729 504 ntBASIC18.5■□□□□ 0.55
CLSTN1O94985 MIR7706-201ENST00000613747 67 ntBASIC18.5■□□□□ 0.55
CLSTN1O94985 AC004706.3-202ENST00000621574 984 ntBASIC18.5■□□□□ 0.55
CLSTN1O94985 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.5■□□□□ 0.55
CLSTN1O94985 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CLSTN1O94985 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CLSTN1O94985 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.5■□□□□ 0.55
CLSTN1O94985 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLSTN1O94985 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CLSTN1O94985 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.49■□□□□ 0.55
CLSTN1O94985 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.49■□□□□ 0.55
CLSTN1O94985 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
CLSTN1O94985 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CLSTN1O94985 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CLSTN1O94985 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.49■□□□□ 0.55
CLSTN1O94985 AC136632.2-201ENST00000512891 861 ntBASIC18.49■□□□□ 0.55
CLSTN1O94985 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.49■□□□□ 0.55
CLSTN1O94985 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.49■□□□□ 0.55
CLSTN1O94985 AL356488.2-201ENST00000602755 427 ntBASIC18.49■□□□□ 0.55
CLSTN1O94985 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
CLSTN1O94985 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.49■□□□□ 0.55
CLSTN1O94985 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.49■□□□□ 0.55
CLSTN1O94985 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLSTN1O94985 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.49■□□□□ 0.55
CLSTN1O94985 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.49■□□□□ 0.55
CLSTN1O94985 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.49■□□□□ 0.55
CLSTN1O94985 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLSTN1O94985 AC092053.1-201ENST00000605787 1936 ntBASIC18.49■□□□□ 0.55
CLSTN1O94985 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLSTN1O94985 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLSTN1O94985 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.48■□□□□ 0.55
CLSTN1O94985 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
CLSTN1O94985 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLSTN1O94985 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLSTN1O94985 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.48■□□□□ 0.55
CLSTN1O94985 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLSTN1O94985 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLSTN1O94985 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.48■□□□□ 0.55
CLSTN1O94985 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLSTN1O94985 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLSTN1O94985 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLSTN1O94985 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLSTN1O94985 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLSTN1O94985 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.48■□□□□ 0.55
CLSTN1O94985 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.48■□□□□ 0.55
CLSTN1O94985 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLSTN1O94985 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
CLSTN1O94985 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.48■□□□□ 0.55
CLSTN1O94985 AC012640.2-201ENST00000561606 901 ntBASIC18.48■□□□□ 0.55
CLSTN1O94985 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.48■□□□□ 0.55
CLSTN1O94985 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.48■□□□□ 0.55
CLSTN1O94985 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLSTN1O94985 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms