Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.68■■□□□ 1.06
LTN1O94822 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
LTN1O94822 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LTN1O94822 AC006538.1-201ENST00000567905 1585 ntBASIC21.68■■□□□ 1.06
LTN1O94822 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC21.68■■□□□ 1.06
LTN1O94822 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LTN1O94822 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LTN1O94822 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC21.68■■□□□ 1.06
LTN1O94822 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LTN1O94822 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.68■■□□□ 1.06
LTN1O94822 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LTN1O94822 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LTN1O94822 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTN1O94822 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTN1O94822 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LTN1O94822 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC21.67■■□□□ 1.06
LTN1O94822 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTN1O94822 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC21.67■■□□□ 1.06
LTN1O94822 MIR658-201ENST00000385210 100 ntBASIC21.67■■□□□ 1.06
LTN1O94822 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC21.67■■□□□ 1.06
LTN1O94822 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC21.67■■□□□ 1.06
LTN1O94822 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
LTN1O94822 AL162274.1-201ENST00000617191 1098 ntBASIC21.67■■□□□ 1.06
LTN1O94822 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTN1O94822 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTN1O94822 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTN1O94822 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LTN1O94822 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTN1O94822 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTN1O94822 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTN1O94822 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTN1O94822 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTN1O94822 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTN1O94822 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
LTN1O94822 Z97205.2-201ENST00000564697 1639 ntBASIC21.66■■□□□ 1.06
LTN1O94822 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LTN1O94822 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LTN1O94822 AC234783.1-201ENST00000441761 496 ntBASIC21.66■■□□□ 1.06
LTN1O94822 SDHAP3-202ENST00000515467 728 ntBASIC21.66■■□□□ 1.06
LTN1O94822 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LTN1O94822 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC21.66■■□□□ 1.06
LTN1O94822 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LTN1O94822 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC21.66■■□□□ 1.06
LTN1O94822 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LTN1O94822 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
LTN1O94822 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.66■■□□□ 1.06
LTN1O94822 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LTN1O94822 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LTN1O94822 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
LTN1O94822 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LTN1O94822 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.66■■□□□ 1.06
LTN1O94822 GRN-214ENST00000589265 1632 ntTSL 5 BASIC21.66■■□□□ 1.06
LTN1O94822 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
LTN1O94822 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
LTN1O94822 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LTN1O94822 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LTN1O94822 RN7SL752P-201ENST00000463779 287 ntBASIC21.66■■□□□ 1.06
LTN1O94822 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC21.66■■□□□ 1.06
LTN1O94822 SUOX-214ENST00000551841 906 ntTSL 3 BASIC21.66■■□□□ 1.06
LTN1O94822 RAB43P1-201ENST00000561790 589 ntBASIC21.66■■□□□ 1.06
LTN1O94822 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LTN1O94822 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LTN1O94822 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LTN1O94822 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LTN1O94822 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LTN1O94822 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.65■■□□□ 1.06
LTN1O94822 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LTN1O94822 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.65■■□□□ 1.06
LTN1O94822 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC21.65■■□□□ 1.06
LTN1O94822 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LTN1O94822 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LTN1O94822 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LTN1O94822 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LTN1O94822 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
LTN1O94822 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LTN1O94822 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
LTN1O94822 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.65■■□□□ 1.06
LTN1O94822 MPV17-208ENST00000405076 603 ntTSL 5 BASIC21.65■■□□□ 1.06
LTN1O94822 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC21.65■■□□□ 1.06
LTN1O94822 HIST1H2BPS3-201ENST00000419683 341 ntBASIC21.65■■□□□ 1.06
LTN1O94822 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LTN1O94822 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC21.65■■□□□ 1.06
LTN1O94822 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC21.65■■□□□ 1.06
LTN1O94822 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC21.65■■□□□ 1.06
LTN1O94822 ORC6-206ENST00000568364 888 ntTSL 5 BASIC21.65■■□□□ 1.06
LTN1O94822 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LTN1O94822 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LTN1O94822 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LTN1O94822 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LTN1O94822 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.65■■□□□ 1.06
LTN1O94822 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LTN1O94822 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
LTN1O94822 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
LTN1O94822 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
LTN1O94822 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC21.64■■□□□ 1.06
LTN1O94822 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LTN1O94822 U82695.1-201ENST00000635752 1889 ntBASIC21.64■■□□□ 1.06
LTN1O94822 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
LTN1O94822 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
LTN1O94822 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms