Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 KRT8P23-201ENST00000560090 1207 ntBASIC16.84■□□□□ 0.29
KDELR3O43731 AP001160.2-201ENST00000596071 487 ntBASIC16.84■□□□□ 0.29
KDELR3O43731 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.84■□□□□ 0.29
KDELR3O43731 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.84■□□□□ 0.29
KDELR3O43731 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.84■□□□□ 0.29
KDELR3O43731 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KDELR3O43731 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KDELR3O43731 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KDELR3O43731 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KDELR3O43731 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
KDELR3O43731 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KDELR3O43731 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.84■□□□□ 0.29
KDELR3O43731 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.84■□□□□ 0.29
KDELR3O43731 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KDELR3O43731 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KDELR3O43731 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.83■□□□□ 0.29
KDELR3O43731 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.83■□□□□ 0.29
KDELR3O43731 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
KDELR3O43731 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
KDELR3O43731 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KDELR3O43731 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KDELR3O43731 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KDELR3O43731 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KDELR3O43731 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KDELR3O43731 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KDELR3O43731 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KDELR3O43731 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KDELR3O43731 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
KDELR3O43731 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KDELR3O43731 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
KDELR3O43731 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KDELR3O43731 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.83■□□□□ 0.28
KDELR3O43731 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.83■□□□□ 0.28
KDELR3O43731 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KDELR3O43731 PRYP6-201ENST00000514804 343 ntBASIC16.83■□□□□ 0.28
KDELR3O43731 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
KDELR3O43731 IGHV3-62-201ENST00000520057 340 ntBASIC16.83■□□□□ 0.28
KDELR3O43731 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.83■□□□□ 0.28
KDELR3O43731 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.83■□□□□ 0.28
KDELR3O43731 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KDELR3O43731 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.83■□□□□ 0.28
KDELR3O43731 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.83■□□□□ 0.28
KDELR3O43731 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.83■□□□□ 0.28
KDELR3O43731 AC073439.1-201ENST00000624121 1774 ntBASIC16.83■□□□□ 0.28
KDELR3O43731 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.83■□□□□ 0.28
KDELR3O43731 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.83■□□□□ 0.28
KDELR3O43731 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KDELR3O43731 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KDELR3O43731 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KDELR3O43731 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KDELR3O43731 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.82■□□□□ 0.28
KDELR3O43731 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.82■□□□□ 0.28
KDELR3O43731 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.82■□□□□ 0.28
KDELR3O43731 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KDELR3O43731 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KDELR3O43731 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.82■□□□□ 0.28
KDELR3O43731 MIR346-201ENST00000362234 95 ntBASIC16.82■□□□□ 0.28
KDELR3O43731 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KDELR3O43731 AC005237.2-201ENST00000434368 219 ntBASIC16.82■□□□□ 0.28
KDELR3O43731 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.82■□□□□ 0.28
KDELR3O43731 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.82■□□□□ 0.28
KDELR3O43731 AC069335.1-201ENST00000489972 472 ntBASIC16.82■□□□□ 0.28
KDELR3O43731 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.82■□□□□ 0.28
KDELR3O43731 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.82■□□□□ 0.28
KDELR3O43731 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.82■□□□□ 0.28
KDELR3O43731 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
KDELR3O43731 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KDELR3O43731 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.82■□□□□ 0.28
KDELR3O43731 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.82■□□□□ 0.28
KDELR3O43731 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.82■□□□□ 0.28
KDELR3O43731 AC073389.1-201ENST00000595595 795 ntBASIC16.82■□□□□ 0.28
KDELR3O43731 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.82■□□□□ 0.28
KDELR3O43731 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KDELR3O43731 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.82■□□□□ 0.28
KDELR3O43731 AC084121.4-201ENST00000641598 221 ntBASIC16.82■□□□□ 0.28
KDELR3O43731 AF228730.8-201ENST00000642140 221 ntBASIC16.82■□□□□ 0.28
KDELR3O43731 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.82■□□□□ 0.28
KDELR3O43731 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KDELR3O43731 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KDELR3O43731 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KDELR3O43731 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KDELR3O43731 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.82■□□□□ 0.28
KDELR3O43731 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
KDELR3O43731 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KDELR3O43731 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KDELR3O43731 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KDELR3O43731 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.81■□□□□ 0.28
KDELR3O43731 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.81■□□□□ 0.28
KDELR3O43731 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
KDELR3O43731 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.81■□□□□ 0.28
KDELR3O43731 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
KDELR3O43731 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.81■□□□□ 0.28
KDELR3O43731 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms