Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.67■□□□□ 0.58
ACTN4O43707 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.67■□□□□ 0.58
ACTN4O43707 AP001350.2-201ENST00000625104 1094 ntBASIC18.67■□□□□ 0.58
ACTN4O43707 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ACTN4O43707 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ACTN4O43707 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.67■□□□□ 0.58
ACTN4O43707 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTN4O43707 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ACTN4O43707 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.67■□□□□ 0.58
ACTN4O43707 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.67■□□□□ 0.58
ACTN4O43707 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTN4O43707 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ACTN4O43707 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.67■□□□□ 0.58
ACTN4O43707 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.67■□□□□ 0.58
ACTN4O43707 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.66■□□□□ 0.58
ACTN4O43707 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.66■□□□□ 0.58
ACTN4O43707 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 AC006449.6-201ENST00000612330 2296 ntBASIC18.66■□□□□ 0.58
ACTN4O43707 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.66■□□□□ 0.58
ACTN4O43707 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.66■□□□□ 0.58
ACTN4O43707 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
ACTN4O43707 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.66■□□□□ 0.58
ACTN4O43707 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 FAM185BP-201ENST00000443595 716 ntBASIC18.66■□□□□ 0.58
ACTN4O43707 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.66■□□□□ 0.58
ACTN4O43707 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
ACTN4O43707 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
ACTN4O43707 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.66■□□□□ 0.58
ACTN4O43707 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ACTN4O43707 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.66■□□□□ 0.58
ACTN4O43707 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.66■□□□□ 0.58
ACTN4O43707 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.66■□□□□ 0.58
ACTN4O43707 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN4O43707 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ACTN4O43707 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ACTN4O43707 LINC01144-201ENST00000626198 1710 ntBASIC18.66■□□□□ 0.58
ACTN4O43707 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.66■□□□□ 0.58
ACTN4O43707 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN4O43707 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN4O43707 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ACTN4O43707 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.65■□□□□ 0.58
ACTN4O43707 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN4O43707 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN4O43707 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN4O43707 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN4O43707 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.65■□□□□ 0.58
ACTN4O43707 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ACTN4O43707 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.65■□□□□ 0.58
ACTN4O43707 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN4O43707 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.65■□□□□ 0.58
ACTN4O43707 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.65■□□□□ 0.58
ACTN4O43707 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.65■□□□□ 0.58
ACTN4O43707 AP002469.2-201ENST00000531724 424 ntBASIC18.65■□□□□ 0.58
ACTN4O43707 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.65■□□□□ 0.58
ACTN4O43707 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.65■□□□□ 0.58
ACTN4O43707 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
ACTN4O43707 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN4O43707 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
ACTN4O43707 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN4O43707 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN4O43707 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.65■□□□□ 0.58
ACTN4O43707 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ACTN4O43707 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.65■□□□□ 0.58
ACTN4O43707 AC024909.3-201ENST00000611513 2257 ntBASIC18.65■□□□□ 0.58
ACTN4O43707 REXO1L8P-201ENST00000604378 1897 ntBASIC18.65■□□□□ 0.58
ACTN4O43707 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.65■□□□□ 0.58
ACTN4O43707 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ACTN4O43707 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
ACTN4O43707 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ACTN4O43707 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.64■□□□□ 0.57
ACTN4O43707 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN4O43707 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN4O43707 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN4O43707 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN4O43707 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.64■□□□□ 0.57
ACTN4O43707 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.64■□□□□ 0.57
ACTN4O43707 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.64■□□□□ 0.57
ACTN4O43707 AC092910.1-201ENST00000482027 1129 ntBASIC18.64■□□□□ 0.57
ACTN4O43707 RNA5SP419-201ENST00000515908 135 ntBASIC18.64■□□□□ 0.57
ACTN4O43707 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms