Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.76■□□□□ 0.27
SMAD6O43541 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.76■□□□□ 0.27
SMAD6O43541 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.76■□□□□ 0.27
SMAD6O43541 AC073389.1-201ENST00000595595 795 ntBASIC16.76■□□□□ 0.27
SMAD6O43541 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.76■□□□□ 0.27
SMAD6O43541 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD6O43541 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.76■□□□□ 0.27
SMAD6O43541 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SMAD6O43541 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD6O43541 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
SMAD6O43541 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD6O43541 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD6O43541 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD6O43541 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SMAD6O43541 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.75■□□□□ 0.27
SMAD6O43541 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SMAD6O43541 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD6O43541 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD6O43541 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD6O43541 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD6O43541 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SMAD6O43541 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SMAD6O43541 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.75■□□□□ 0.27
SMAD6O43541 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SMAD6O43541 SPDYE14P-201ENST00000442619 822 ntBASIC16.75■□□□□ 0.27
SMAD6O43541 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD6O43541 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.75■□□□□ 0.27
SMAD6O43541 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD6O43541 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.75■□□□□ 0.27
SMAD6O43541 AC105233.2-201ENST00000523697 349 ntBASIC16.75■□□□□ 0.27
SMAD6O43541 AF228730.5-201ENST00000530288 346 ntBASIC16.75■□□□□ 0.27
SMAD6O43541 RFPL4AP1-201ENST00000530883 850 ntBASIC16.75■□□□□ 0.27
SMAD6O43541 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
SMAD6O43541 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD6O43541 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.75■□□□□ 0.27
SMAD6O43541 AC026150.2-201ENST00000564693 1156 ntBASIC16.75■□□□□ 0.27
SMAD6O43541 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.75■□□□□ 0.27
SMAD6O43541 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.75■□□□□ 0.27
SMAD6O43541 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD6O43541 AC106028.4-201ENST00000614509 607 ntBASIC16.75■□□□□ 0.27
SMAD6O43541 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SMAD6O43541 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.75■□□□□ 0.27
SMAD6O43541 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SMAD6O43541 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.75■□□□□ 0.27
SMAD6O43541 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SMAD6O43541 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.75■□□□□ 0.27
SMAD6O43541 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD6O43541 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD6O43541 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.74■□□□□ 0.27
SMAD6O43541 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.74■□□□□ 0.27
SMAD6O43541 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD6O43541 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.74■□□□□ 0.27
SMAD6O43541 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SMAD6O43541 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.74■□□□□ 0.27
SMAD6O43541 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD6O43541 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD6O43541 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD6O43541 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD6O43541 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD6O43541 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.74■□□□□ 0.27
SMAD6O43541 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.74■□□□□ 0.27
SMAD6O43541 ALG1L8P-201ENST00000533887 760 ntBASIC16.74■□□□□ 0.27
SMAD6O43541 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SMAD6O43541 AC025678.2-201ENST00000562061 970 ntBASIC16.74■□□□□ 0.27
SMAD6O43541 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD6O43541 Z92544.3-201ENST00000624747 417 ntBASIC16.74■□□□□ 0.27
SMAD6O43541 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD6O43541 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD6O43541 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.74■□□□□ 0.27
SMAD6O43541 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD6O43541 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.74■□□□□ 0.27
SMAD6O43541 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMAD6O43541 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SMAD6O43541 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
SMAD6O43541 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.74■□□□□ 0.27
SMAD6O43541 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.74■□□□□ 0.27
SMAD6O43541 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.74■□□□□ 0.27
SMAD6O43541 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SMAD6O43541 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD6O43541 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD6O43541 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SMAD6O43541 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
SMAD6O43541 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD6O43541 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms