Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN5O00501 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN5O00501 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN5O00501 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CLDN5O00501 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CLDN5O00501 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.51■□□□□ 0.39
CLDN5O00501 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN5O00501 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CLDN5O00501 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN5O00501 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN5O00501 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN5O00501 KRT18P32-201ENST00000424695 1287 ntBASIC17.51■□□□□ 0.39
CLDN5O00501 HLA-J-202ENST00000469281 1241 ntBASIC17.51■□□□□ 0.39
CLDN5O00501 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.51■□□□□ 0.39
CLDN5O00501 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN5O00501 SLC25A39P2-201ENST00000537614 270 ntBASIC17.51■□□□□ 0.39
CLDN5O00501 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.51■□□□□ 0.39
CLDN5O00501 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CLDN5O00501 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN5O00501 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.51■□□□□ 0.39
CLDN5O00501 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.51■□□□□ 0.39
CLDN5O00501 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN5O00501 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.51■□□□□ 0.39
CLDN5O00501 AC008267.7-201ENST00000624570 1194 ntBASIC17.51■□□□□ 0.39
CLDN5O00501 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CLDN5O00501 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CLDN5O00501 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN5O00501 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CLDN5O00501 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN5O00501 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN5O00501 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN5O00501 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN5O00501 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN5O00501 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN5O00501 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CLDN5O00501 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CLDN5O00501 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.5■□□□□ 0.39
CLDN5O00501 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.5■□□□□ 0.39
CLDN5O00501 GPS2P2-201ENST00000430745 888 ntBASIC17.5■□□□□ 0.39
CLDN5O00501 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.5■□□□□ 0.39
CLDN5O00501 AP000842.3-202ENST00000569238 1080 ntBASIC17.5■□□□□ 0.39
CLDN5O00501 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.5■□□□□ 0.39
CLDN5O00501 AC009093.7-201ENST00000623853 1223 ntBASIC17.5■□□□□ 0.39
CLDN5O00501 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN5O00501 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN5O00501 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN5O00501 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.5■□□□□ 0.39
CLDN5O00501 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CLDN5O00501 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN5O00501 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CLDN5O00501 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN5O00501 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN5O00501 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN5O00501 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN5O00501 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN5O00501 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CLDN5O00501 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 AC073439.1-201ENST00000624121 1774 ntBASIC17.49■□□□□ 0.39
CLDN5O00501 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN5O00501 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN5O00501 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN5O00501 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN5O00501 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN5O00501 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN5O00501 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN5O00501 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms