Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLIC1O00299 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CLIC1O00299 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CLIC1O00299 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 AC006449.6-201ENST00000612330 2296 ntBASIC15.73■□□□□ 0.11
CLIC1O00299 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 PTCHD3P3-201ENST00000403073 906 ntBASIC15.73■□□□□ 0.11
CLIC1O00299 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.73■□□□□ 0.11
CLIC1O00299 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLIC1O00299 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.73■□□□□ 0.11
CLIC1O00299 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
CLIC1O00299 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.73■□□□□ 0.11
CLIC1O00299 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.73■□□□□ 0.11
CLIC1O00299 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.73■□□□□ 0.11
CLIC1O00299 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLIC1O00299 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.73■□□□□ 0.11
CLIC1O00299 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.73■□□□□ 0.11
CLIC1O00299 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.73■□□□□ 0.11
CLIC1O00299 AC091167.2-201ENST00000579581 588 ntBASIC15.73■□□□□ 0.11
CLIC1O00299 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.73■□□□□ 0.11
CLIC1O00299 MTDHP4-201ENST00000600287 670 ntBASIC15.73■□□□□ 0.11
CLIC1O00299 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.73■□□□□ 0.11
CLIC1O00299 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.73■□□□□ 0.11
CLIC1O00299 AC004706.3-202ENST00000621574 984 ntBASIC15.73■□□□□ 0.11
CLIC1O00299 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.73■□□□□ 0.11
CLIC1O00299 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.73■□□□□ 0.11
CLIC1O00299 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.73■□□□□ 0.11
CLIC1O00299 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLIC1O00299 PI4KAP1-204ENST00000612579 1703 ntBASIC15.73■□□□□ 0.11
CLIC1O00299 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CLIC1O00299 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.73■□□□□ 0.11
CLIC1O00299 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
CLIC1O00299 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.73■□□□□ 0.11
CLIC1O00299 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CLIC1O00299 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLIC1O00299 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.72■□□□□ 0.11
CLIC1O00299 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.72■□□□□ 0.11
CLIC1O00299 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.72■□□□□ 0.11
CLIC1O00299 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.72■□□□□ 0.11
CLIC1O00299 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.72■□□□□ 0.11
CLIC1O00299 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLIC1O00299 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.72■□□□□ 0.11
CLIC1O00299 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
CLIC1O00299 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CLIC1O00299 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.72■□□□□ 0.11
CLIC1O00299 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.72■□□□□ 0.11
CLIC1O00299 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.72■□□□□ 0.11
CLIC1O00299 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.72■□□□□ 0.11
CLIC1O00299 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.72■□□□□ 0.11
CLIC1O00299 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.72■□□□□ 0.11
CLIC1O00299 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.72■□□□□ 0.11
CLIC1O00299 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.72■□□□□ 0.11
CLIC1O00299 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CLIC1O00299 AL355877.3-201ENST00000622820 899 ntBASIC15.72■□□□□ 0.11
CLIC1O00299 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.72■□□□□ 0.11
CLIC1O00299 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.72■□□□□ 0.11
CLIC1O00299 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.72■□□□□ 0.11
CLIC1O00299 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLIC1O00299 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.71■□□□□ 0.11
CLIC1O00299 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.71■□□□□ 0.11
CLIC1O00299 AL603832.2-201ENST00000566195 2125 ntBASIC15.71■□□□□ 0.11
CLIC1O00299 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms