Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 AC019069.1-201ENST00000610008 1333 ntBASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 GPAT2P1-201ENST00000444924 1672 ntBASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CHKB-CPT1BH3BT56 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 AC013268.4-201ENST00000637413 2228 ntBASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CHKB-CPT1BH3BT56 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 TUBB8P6-201ENST00000436895 1288 ntBASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 CREM-229ENST00000474362 1030 ntTSL 2 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 AC012414.1-201ENST00000556676 535 ntBASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 AL354811.1-201ENST00000610286 706 ntBASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 AC012354.3-201ENST00000623734 483 ntBASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 KRT8P32-201ENST00000512863 1461 ntBASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC9.21□□□□□ -0.94
CHKB-CPT1BH3BT56 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms