Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 DBET-201ENST00000630918 3363 ntBASIC15.27■□□□□ 0.04
CLN6Q9NWW5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 TSPY22P-201ENST00000427496 604 ntBASIC15.27■□□□□ 0.04
CLN6Q9NWW5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 AC011840.4-201ENST00000578471 627 ntBASIC15.27■□□□□ 0.04
CLN6Q9NWW5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 AC083849.1-201ENST00000615227 514 ntBASIC15.27■□□□□ 0.04
CLN6Q9NWW5 AC006011.2-201ENST00000621313 1158 ntBASIC15.27■□□□□ 0.04
CLN6Q9NWW5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.27■□□□□ 0.04
CLN6Q9NWW5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CLN6Q9NWW5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLN6Q9NWW5 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.27■□□□□ 0.03
CLN6Q9NWW5 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLN6Q9NWW5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.27■□□□□ 0.03
CLN6Q9NWW5 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLN6Q9NWW5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CLN6Q9NWW5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLN6Q9NWW5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLN6Q9NWW5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLN6Q9NWW5 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CLN6Q9NWW5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CLN6Q9NWW5 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLN6Q9NWW5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 AC023824.1-201ENST00000562945 2975 ntBASIC15.26■□□□□ 0.03
CLN6Q9NWW5 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 AL645929.1-201ENST00000420084 975 ntBASIC15.26■□□□□ 0.03
CLN6Q9NWW5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 AC090616.6-201ENST00000582640 721 ntBASIC15.26■□□□□ 0.03
CLN6Q9NWW5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.26■□□□□ 0.03
CLN6Q9NWW5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 GGT4P-201ENST00000623672 1708 ntBASIC15.26■□□□□ 0.03
CLN6Q9NWW5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN6Q9NWW5 KRT8P49-201ENST00000604166 1432 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms