Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TRMT13Q9NUP7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRMT13Q9NUP7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRMT13Q9NUP7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 AL512384.1-201ENST00000406683 331 ntBASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 AC087499.6-201ENST00000411576 835 ntBASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 PCDHB17P-201ENST00000539533 2393 ntBASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 AL391825.1-201ENST00000457671 1364 ntBASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRMT13Q9NUP7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRMT13Q9NUP7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRMT13Q9NUP7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRMT13Q9NUP7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRMT13Q9NUP7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRMT13Q9NUP7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRMT13Q9NUP7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.11■□□□□ 0.49
TRMT13Q9NUP7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRMT13Q9NUP7 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.11■□□□□ 0.49
TRMT13Q9NUP7 AC093004.1-201ENST00000508850 424 ntBASIC18.11■□□□□ 0.49
TRMT13Q9NUP7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms