Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDK5RAP2Q96SN8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDK5RAP2Q96SN8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 SPTLC1P1-201ENST00000447199 261 ntBASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 AP005018.1-201ENST00000525475 301 ntBASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 AC005225.4-201ENST00000557330 545 ntBASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.33■□□□□ 0.68
CDK5RAP2Q96SN8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 AC009407.1-201ENST00000568958 598 ntBASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 CYP4F24P-201ENST00000586049 1580 ntBASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP2Q96SN8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 AL592424.1-201ENST00000563624 1536 ntBASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 AL035252.4-201ENST00000624174 288 ntBASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 API5-211ENST00000534695 560 ntTSL 5 BASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 FLJ38576-201ENST00000623820 2459 ntBASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 AL109936.8-201ENST00000641772 604 ntBASIC19.31■□□□□ 0.68
CDK5RAP2Q96SN8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 INGX-202ENST00000489074 768 ntBASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 TERF1P3-201ENST00000505638 1227 ntBASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 AC012645.4-201ENST00000610691 1061 ntBASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP2Q96SN8 AC005622.1-201ENST00000636801 1703 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms