Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 AC006486.2-201ENST00000624246 2199 ntBASIC14.37□□□□□ -0.11
CMTM3Q96MX0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 COX11P1-201ENST00000489116 835 ntBASIC14.37□□□□□ -0.11
CMTM3Q96MX0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 AL441883.1-201ENST00000566170 1045 ntBASIC14.37□□□□□ -0.11
CMTM3Q96MX0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 TERC-201ENST00000602385 541 ntBASIC14.37□□□□□ -0.11
CMTM3Q96MX0 PGM5P2-202ENST00000637225 1043 ntBASIC14.37□□□□□ -0.11
CMTM3Q96MX0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 PCGF3-213ENST00000620529 1899 ntBASIC14.37□□□□□ -0.11
CMTM3Q96MX0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.37□□□□□ -0.11
CMTM3Q96MX0 LINC02228-204ENST00000642115 2962 ntBASIC14.37□□□□□ -0.11
CMTM3Q96MX0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.36□□□□□ -0.11
CMTM3Q96MX0 TOP3BP1-201ENST00000420768 1380 ntBASIC14.36□□□□□ -0.11
CMTM3Q96MX0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 REXO1L8P-201ENST00000604378 1897 ntBASIC14.36□□□□□ -0.11
CMTM3Q96MX0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.36□□□□□ -0.11
CMTM3Q96MX0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 KRT18P22-201ENST00000402024 1347 ntBASIC14.36□□□□□ -0.11
CMTM3Q96MX0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CMTM3Q96MX0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms