Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 AD000864.1-201ENST00000624076 2295 ntBASIC19.47■□□□□ 0.71
TRIM47Q96LD4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 AC241585.1-201ENST00000433527 519 ntBASIC19.46■□□□□ 0.71
TRIM47Q96LD4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM47Q96LD4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
TRIM47Q96LD4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 MIR4453-201ENST00000584019 89 ntBASIC19.44■□□□□ 0.7
TRIM47Q96LD4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms