Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 CYP2D8P-201ENST00000433633 1490 ntBASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 AL138831.2-201ENST00000606564 490 ntBASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 AL390719.2-201ENST00000606993 987 ntBASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 AC010947.1-201ENST00000623454 693 ntBASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 AL031731.1-201ENST00000642131 2094 ntBASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 SNX33P1-201ENST00000592116 1762 ntBASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 AL512652.2-201ENST00000625156 1716 ntBASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.27□□□□□ -0.12
SMIM4Q8WVI0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 ACTG1P4-201ENST00000425123 1122 ntBASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 NAPSB-206ENST00000562112 1266 ntBASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 AC005332.3-201ENST00000589904 676 ntBASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM4Q8WVI0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 SPDYE15P-201ENST00000424157 909 ntBASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 AC142381.4-202ENST00000563973 229 ntBASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms