Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.03□□□□□ -0.32
C3orf56Q8N813 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 AL133338.1-201ENST00000565695 1517 ntBASIC13.03□□□□□ -0.32
C3orf56Q8N813 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C3orf56Q8N813 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C3orf56Q8N813 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C3orf56Q8N813 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C3orf56Q8N813 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C3orf56Q8N813 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C3orf56Q8N813 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
C3orf56Q8N813 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
C3orf56Q8N813 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C3orf56Q8N813 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.02□□□□□ -0.32
C3orf56Q8N813 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
C3orf56Q8N813 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C3orf56Q8N813 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
C3orf56Q8N813 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C3orf56Q8N813 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C3orf56Q8N813 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C3orf56Q8N813 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C3orf56Q8N813 HLA-H-201ENST00000383620 1096 ntBASIC13.02□□□□□ -0.33
C3orf56Q8N813 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
C3orf56Q8N813 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 GNAQP1-201ENST00000444815 1067 ntBASIC13.02□□□□□ -0.33
C3orf56Q8N813 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C3orf56Q8N813 AC022210.1-201ENST00000449856 793 ntBASIC13.02□□□□□ -0.33
C3orf56Q8N813 KRT18P34-201ENST00000488218 1270 ntBASIC13.02□□□□□ -0.33
C3orf56Q8N813 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 TEX28P1-201ENST00000613479 1221 ntBASIC13.02□□□□□ -0.33
C3orf56Q8N813 TEX28P2-201ENST00000617764 1221 ntBASIC13.02□□□□□ -0.33
C3orf56Q8N813 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C3orf56Q8N813 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C3orf56Q8N813 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C3orf56Q8N813 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C3orf56Q8N813 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C3orf56Q8N813 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C3orf56Q8N813 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
C3orf56Q8N813 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C3orf56Q8N813 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C3orf56Q8N813 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.02□□□□□ -0.33
C3orf56Q8N813 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 AC116562.4-201ENST00000641316 2276 ntBASIC13.01□□□□□ -0.33
C3orf56Q8N813 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 SPDYE19P-201ENST00000338590 713 ntBASIC13.01□□□□□ -0.33
C3orf56Q8N813 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 AC079776.1-201ENST00000401540 1152 ntBASIC13.01□□□□□ -0.33
C3orf56Q8N813 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 AC093004.1-201ENST00000508850 424 ntBASIC13.01□□□□□ -0.33
C3orf56Q8N813 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 AC133552.6-201ENST00000613406 534 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms