Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLDN22Q8N7P3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 TSPY26P-202ENST00000565928 3884 ntBASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 PRELID1P1-202ENST00000567272 903 ntBASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN22Q8N7P3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 AC126177.1-201ENST00000547829 2218 ntBASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 TSPY19P-201ENST00000418461 509 ntBASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 TSPY18P-201ENST00000441642 509 ntBASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN22Q8N7P3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CLDN22Q8N7P3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN22Q8N7P3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN22Q8N7P3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.21■□□□□ 0.02
CLDN22Q8N7P3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN22Q8N7P3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN22Q8N7P3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN22Q8N7P3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN22Q8N7P3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.21■□□□□ 0.02
CLDN22Q8N7P3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN22Q8N7P3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms