Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 SLC25A6P4-201ENST00000586535 553 ntBASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 CYP2A7P1-201ENST00000595391 815 ntBASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 AL049840.3-201ENST00000602669 611 ntBASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TTC9CQ8N5M4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TTC9CQ8N5M4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
TTC9CQ8N5M4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TTC9CQ8N5M4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TTC9CQ8N5M4 SLC22A20-204ENST00000530038 1673 ntBASIC13.21□□□□□ -0.3
TTC9CQ8N5M4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.21□□□□□ -0.3
TTC9CQ8N5M4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TTC9CQ8N5M4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TTC9CQ8N5M4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TTC9CQ8N5M4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 AC018695.7-201ENST00000624587 2492 ntBASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 FLJ16779-201ENST00000612722 7638 ntBASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 SNX33P1-201ENST00000592116 1762 ntBASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 AC098831.1-202ENST00000438821 336 ntBASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 FAM185BP-201ENST00000443595 716 ntBASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 AC108751.1-201ENST00000490852 363 ntBASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 RNA5SP419-201ENST00000515908 135 ntBASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 OR7E47P-204ENST00000575924 449 ntBASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.2□□□□□ -0.3
TTC9CQ8N5M4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms