Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 AC004870.1-201ENST00000315132 882 ntBASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 MINOS1P3-201ENST00000457048 203 ntBASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CRLF3Q8IUI8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 AL353801.3-201ENST00000609898 542 ntBASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CRLF3Q8IUI8 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
CRLF3Q8IUI8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 AC003669.1-201ENST00000334569 611 ntBASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 EMBP1-201ENST00000458200 901 ntBASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 LINC01711-201ENST00000598340 967 ntBASIC16.7■□□□□ 0.26
CRLF3Q8IUI8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms