Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 RCN1P2-201ENST00000398357 915 ntBASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 MRPL3P1-201ENST00000400109 1033 ntBASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 AL138831.2-201ENST00000606564 490 ntBASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDZRN4Q6ZMN7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC19.24■□□□□ 0.67
PDZRN4Q6ZMN7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDZRN4Q6ZMN7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDZRN4Q6ZMN7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDZRN4Q6ZMN7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDZRN4Q6ZMN7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.23■□□□□ 0.67
PDZRN4Q6ZMN7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDZRN4Q6ZMN7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDZRN4Q6ZMN7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDZRN4Q6ZMN7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDZRN4Q6ZMN7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PDZRN4Q6ZMN7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDZRN4Q6ZMN7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDZRN4Q6ZMN7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDZRN4Q6ZMN7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms