Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 IGHV3-52-201ENST00000519770 353 ntBASIC12.64□□□□□ -0.39
MRPL54Q6P161 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 AL137784.2-201ENST00000607332 1000 ntBASIC12.64□□□□□ -0.39
MRPL54Q6P161 AC009154.2-201ENST00000621177 724 ntBASIC12.64□□□□□ -0.39
MRPL54Q6P161 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 GPR89P-201ENST00000407924 1495 ntBASIC12.64□□□□□ -0.39
MRPL54Q6P161 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
MRPL54Q6P161 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL54Q6P161 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 PTENP1-202ENST00000532280 3996 ntBASIC12.63□□□□□ -0.39
MRPL54Q6P161 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL54Q6P161 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
MRPL54Q6P161 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
MRPL54Q6P161 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL54Q6P161 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
MRPL54Q6P161 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
MRPL54Q6P161 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.62□□□□□ -0.39
MRPL54Q6P161 AC139749.1-202ENST00000617529 3139 ntBASIC12.62□□□□□ -0.39
MRPL54Q6P161 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL54Q6P161 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL54Q6P161 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL54Q6P161 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL54Q6P161 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL54Q6P161 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL54Q6P161 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL54Q6P161 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
MRPL54Q6P161 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL54Q6P161 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL54Q6P161 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL54Q6P161 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL54Q6P161 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL54Q6P161 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL54Q6P161 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.62□□□□□ -0.39
MRPL54Q6P161 AC026271.2-201ENST00000428091 497 ntBASIC12.62□□□□□ -0.39
MRPL54Q6P161 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.62□□□□□ -0.39
MRPL54Q6P161 TSPY17P-201ENST00000450329 467 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms