Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATPAF1Q5TC12 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 AC004870.1-201ENST00000315132 882 ntBASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 EMBP1-201ENST00000458200 901 ntBASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 RN7SL510P-201ENST00000581311 263 ntBASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 NKAPP1-205ENST00000585790 367 ntBASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 AL022326.1-202ENST00000641533 845 ntBASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.53□□□□□ -0.08
ATPAF1Q5TC12 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ATPAF1Q5TC12 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ATPAF1Q5TC12 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms