Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-BQ31612 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-BQ31612 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-BQ31612 SLC7A15P-201ENST00000424028 1363 ntBASIC16.04■□□□□ 0.16
HLA-BQ31612 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HLA-BQ31612 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-BQ31612 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HLA-BQ31612 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-BQ31612 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-BQ31612 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HLA-BQ31612 AC114501.2-201ENST00000439631 535 ntBASIC16.04■□□□□ 0.16
HLA-BQ31612 ACA64.2-201ENST00000459014 129 ntBASIC16.04■□□□□ 0.16
HLA-BQ31612 SPDYE18-201ENST00000510091 1050 ntBASIC16.04■□□□□ 0.16
HLA-BQ31612 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-BQ31612 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.04■□□□□ 0.16
HLA-BQ31612 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-BQ31612 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HLA-BQ31612 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
HLA-BQ31612 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-BQ31612 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
HLA-BQ31612 AC024267.1-201ENST00000582320 895 ntBASIC16.04■□□□□ 0.16
HLA-BQ31612 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.04■□□□□ 0.16
HLA-BQ31612 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-BQ31612 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-BQ31612 SNX33P1-201ENST00000592116 1762 ntBASIC16.04■□□□□ 0.16
HLA-BQ31612 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-BQ31612 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HLA-BQ31612 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-BQ31612 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-BQ31612 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-BQ31612 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-BQ31612 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-BQ31612 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-BQ31612 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-BQ31612 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-BQ31612 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-BQ31612 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
HLA-BQ31612 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HLA-BQ31612 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HLA-BQ31612 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HLA-BQ31612 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.03■□□□□ 0.16
HLA-BQ31612 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.03■□□□□ 0.16
HLA-BQ31612 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.03■□□□□ 0.16
HLA-BQ31612 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.03■□□□□ 0.16
HLA-BQ31612 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.03■□□□□ 0.16
HLA-BQ31612 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-BQ31612 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-BQ31612 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HLA-BQ31612 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.03■□□□□ 0.16
HLA-BQ31612 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.03■□□□□ 0.16
HLA-BQ31612 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-BQ31612 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.03■□□□□ 0.16
HLA-BQ31612 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.03■□□□□ 0.16
HLA-BQ31612 AL033527.5-202ENST00000641632 1098 ntBASIC16.03■□□□□ 0.16
HLA-BQ31612 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-BQ31612 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.03■□□□□ 0.16
HLA-BQ31612 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HLA-BQ31612 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-BQ31612 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
HLA-BQ31612 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-BQ31612 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-BQ31612 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-BQ31612 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HLA-BQ31612 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-BQ31612 KRT8P12-202ENST00000472924 1397 ntBASIC16.02■□□□□ 0.16
HLA-BQ31612 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.02■□□□□ 0.16
HLA-BQ31612 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-BQ31612 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.02■□□□□ 0.16
HLA-BQ31612 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-BQ31612 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-BQ31612 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.02■□□□□ 0.16
HLA-BQ31612 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-BQ31612 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-BQ31612 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-BQ31612 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-BQ31612 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
HLA-BQ31612 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-BQ31612 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-BQ31612 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.02■□□□□ 0.16
HLA-BQ31612 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.02■□□□□ 0.16
HLA-BQ31612 AC079776.1-201ENST00000401540 1152 ntBASIC16.02■□□□□ 0.16
HLA-BQ31612 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.02■□□□□ 0.16
HLA-BQ31612 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms