Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 CETN4P-206ENST00000642099 2168 ntBASIC19.81■□□□□ 0.76
PDS5AQ29RF7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 AC009477.1-201ENST00000452936 217 ntBASIC19.8■□□□□ 0.76
PDS5AQ29RF7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDS5AQ29RF7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 AL035633.1-201ENST00000406139 838 ntBASIC19.79■□□□□ 0.76
PDS5AQ29RF7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 ZNF890P-202ENST00000530367 1156 ntBASIC19.79■□□□□ 0.76
PDS5AQ29RF7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.79■□□□□ 0.76
PDS5AQ29RF7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
PDS5AQ29RF7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 AC002472.2-201ENST00000442739 958 ntBASIC19.78■□□□□ 0.76
PDS5AQ29RF7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 RN7SL204P-201ENST00000582831 262 ntBASIC19.78■□□□□ 0.76
PDS5AQ29RF7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 AC087499.5-201ENST00000452760 1342 ntBASIC19.78■□□□□ 0.76
PDS5AQ29RF7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.78■□□□□ 0.76
PDS5AQ29RF7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 RPL37AP1-201ENST00000412502 279 ntBASIC19.77■□□□□ 0.76
PDS5AQ29RF7 TSPY16P-201ENST00000449843 468 ntBASIC19.77■□□□□ 0.76
PDS5AQ29RF7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 AL079307.3-201ENST00000556114 283 ntBASIC19.77■□□□□ 0.76
PDS5AQ29RF7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 AL844908.2-201ENST00000609461 460 ntBASIC19.77■□□□□ 0.76
PDS5AQ29RF7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.77■□□□□ 0.76
PDS5AQ29RF7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms