Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DSC1Q08554 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DSC1Q08554 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DSC1Q08554 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DSC1Q08554 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.56■□□□□ 0.4
DSC1Q08554 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
DSC1Q08554 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.56■□□□□ 0.4
DSC1Q08554 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DSC1Q08554 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.56■□□□□ 0.4
DSC1Q08554 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DSC1Q08554 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
DSC1Q08554 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DSC1Q08554 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DSC1Q08554 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.56■□□□□ 0.4
DSC1Q08554 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.56■□□□□ 0.4
DSC1Q08554 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
DSC1Q08554 PIN1P1-201ENST00000412108 996 ntBASIC17.56■□□□□ 0.4
DSC1Q08554 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.56■□□□□ 0.4
DSC1Q08554 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.56■□□□□ 0.4
DSC1Q08554 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.56■□□□□ 0.4
DSC1Q08554 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DSC1Q08554 ZNF890P-202ENST00000530367 1156 ntBASIC17.56■□□□□ 0.4
DSC1Q08554 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.56■□□□□ 0.4
DSC1Q08554 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.56■□□□□ 0.4
DSC1Q08554 AC012645.4-201ENST00000610691 1061 ntBASIC17.56■□□□□ 0.4
DSC1Q08554 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DSC1Q08554 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
DSC1Q08554 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.56■□□□□ 0.4
DSC1Q08554 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DSC1Q08554 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
DSC1Q08554 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DSC1Q08554 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DSC1Q08554 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DSC1Q08554 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DSC1Q08554 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.56■□□□□ 0.4
DSC1Q08554 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.56■□□□□ 0.4
DSC1Q08554 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.55■□□□□ 0.4
DSC1Q08554 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.55■□□□□ 0.4
DSC1Q08554 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
DSC1Q08554 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.55■□□□□ 0.4
DSC1Q08554 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.55■□□□□ 0.4
DSC1Q08554 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.55■□□□□ 0.4
DSC1Q08554 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.55■□□□□ 0.4
DSC1Q08554 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.55■□□□□ 0.4
DSC1Q08554 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.55■□□□□ 0.4
DSC1Q08554 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.55■□□□□ 0.4
DSC1Q08554 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.55■□□□□ 0.4
DSC1Q08554 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.55■□□□□ 0.4
DSC1Q08554 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.55■□□□□ 0.4
DSC1Q08554 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.55■□□□□ 0.4
DSC1Q08554 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
DSC1Q08554 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.55■□□□□ 0.4
DSC1Q08554 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.55■□□□□ 0.4
DSC1Q08554 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.55■□□□□ 0.4
DSC1Q08554 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DSC1Q08554 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DSC1Q08554 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DSC1Q08554 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DSC1Q08554 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DSC1Q08554 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DSC1Q08554 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.54■□□□□ 0.4
DSC1Q08554 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.54■□□□□ 0.4
DSC1Q08554 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DSC1Q08554 AC105020.1-201ENST00000435356 2205 ntBASIC17.54■□□□□ 0.4
DSC1Q08554 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.54■□□□□ 0.4
DSC1Q08554 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
DSC1Q08554 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DSC1Q08554 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DSC1Q08554 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DSC1Q08554 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
DSC1Q08554 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.54■□□□□ 0.4
DSC1Q08554 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.54■□□□□ 0.4
DSC1Q08554 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.54■□□□□ 0.4
DSC1Q08554 AP005018.1-201ENST00000525475 301 ntBASIC17.54■□□□□ 0.4
DSC1Q08554 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.54■□□□□ 0.4
DSC1Q08554 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
DSC1Q08554 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.54■□□□□ 0.4
DSC1Q08554 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
DSC1Q08554 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
DSC1Q08554 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms