Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.13□□□□□ -0.15
SSBP1Q04837 TMBIM7P-203ENST00000641617 1718 ntBASIC14.13□□□□□ -0.15
SSBP1Q04837 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 TOP3BP1-201ENST00000420768 1380 ntBASIC14.13□□□□□ -0.15
SSBP1Q04837 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.13□□□□□ -0.15
SSBP1Q04837 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 PCGF3-213ENST00000620529 1899 ntBASIC14.13□□□□□ -0.15
SSBP1Q04837 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.13□□□□□ -0.15
SSBP1Q04837 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SSBP1Q04837 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SSBP1Q04837 MIR935-201ENST00000401179 91 ntBASIC14.13□□□□□ -0.15
SSBP1Q04837 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP1Q04837 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.13□□□□□ -0.15
SSBP1Q04837 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.13□□□□□ -0.15
SSBP1Q04837 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SSBP1Q04837 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SSBP1Q04837 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP1Q04837 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP1Q04837 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.13□□□□□ -0.15
SSBP1Q04837 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP1Q04837 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP1Q04837 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP1Q04837 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.13□□□□□ -0.15
SSBP1Q04837 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP1Q04837 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 AC067930.6-201ENST00000623257 4947 ntBASIC14.12□□□□□ -0.15
SSBP1Q04837 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 REXO1L8P-201ENST00000604378 1897 ntBASIC14.12□□□□□ -0.15
SSBP1Q04837 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP1Q04837 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SSBP1Q04837 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.12□□□□□ -0.15
SSBP1Q04837 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP1Q04837 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SSBP1Q04837 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.12□□□□□ -0.15
SSBP1Q04837 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP1Q04837 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.12□□□□□ -0.15
SSBP1Q04837 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP1Q04837 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP1Q04837 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP1Q04837 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.12□□□□□ -0.15
SSBP1Q04837 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
SSBP1Q04837 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.12□□□□□ -0.15
SSBP1Q04837 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.12□□□□□ -0.15
SSBP1Q04837 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SSBP1Q04837 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.12□□□□□ -0.15
SSBP1Q04837 TERC-201ENST00000602385 541 ntBASIC14.12□□□□□ -0.15
SSBP1Q04837 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.12□□□□□ -0.15
SSBP1Q04837 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.12□□□□□ -0.15
SSBP1Q04837 PGM5P2-202ENST00000637225 1043 ntBASIC14.12□□□□□ -0.15
SSBP1Q04837 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SSBP1Q04837 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SSBP1Q04837 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP1Q04837 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SSBP1Q04837 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP1Q04837 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.11□□□□□ -0.15
SSBP1Q04837 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SSBP1Q04837 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms