Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.86■□□□□ 0.45
SMAD3P84022 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SMAD3P84022 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.86■□□□□ 0.45
SMAD3P84022 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.86■□□□□ 0.45
SMAD3P84022 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
SMAD3P84022 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.86■□□□□ 0.45
SMAD3P84022 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.86■□□□□ 0.45
SMAD3P84022 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.86■□□□□ 0.45
SMAD3P84022 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.86■□□□□ 0.45
SMAD3P84022 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.86■□□□□ 0.45
SMAD3P84022 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.86■□□□□ 0.45
SMAD3P84022 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.86■□□□□ 0.45
SMAD3P84022 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.86■□□□□ 0.45
SMAD3P84022 AC093726.1-201ENST00000608064 963 ntBASIC17.86■□□□□ 0.45
SMAD3P84022 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.86■□□□□ 0.45
SMAD3P84022 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.86■□□□□ 0.45
SMAD3P84022 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.86■□□□□ 0.45
SMAD3P84022 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SMAD3P84022 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD3P84022 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.85■□□□□ 0.45
SMAD3P84022 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD3P84022 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD3P84022 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.85■□□□□ 0.45
SMAD3P84022 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SMAD3P84022 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SMAD3P84022 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.85■□□□□ 0.45
SMAD3P84022 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD3P84022 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD3P84022 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
SMAD3P84022 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.85■□□□□ 0.45
SMAD3P84022 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD3P84022 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD3P84022 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD3P84022 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD3P84022 BRWD1P1-201ENST00000401091 371 ntBASIC17.85■□□□□ 0.45
SMAD3P84022 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SMAD3P84022 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SMAD3P84022 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.85■□□□□ 0.45
SMAD3P84022 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD3P84022 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.85■□□□□ 0.45
SMAD3P84022 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.85■□□□□ 0.45
SMAD3P84022 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.85■□□□□ 0.45
SMAD3P84022 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SMAD3P84022 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD3P84022 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.85■□□□□ 0.45
SMAD3P84022 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.85■□□□□ 0.45
SMAD3P84022 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.85■□□□□ 0.45
SMAD3P84022 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD3P84022 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD3P84022 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD3P84022 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.85■□□□□ 0.45
SMAD3P84022 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SMAD3P84022 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.85■□□□□ 0.45
SMAD3P84022 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.85■□□□□ 0.45
SMAD3P84022 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SMAD3P84022 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD3P84022 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD3P84022 AC007613.1-201ENST00000572811 2597 ntBASIC17.85■□□□□ 0.45
SMAD3P84022 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMAD3P84022 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SMAD3P84022 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMAD3P84022 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SMAD3P84022 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMAD3P84022 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SMAD3P84022 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.84■□□□□ 0.45
SMAD3P84022 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMAD3P84022 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.84■□□□□ 0.45
SMAD3P84022 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SMAD3P84022 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMAD3P84022 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMAD3P84022 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SMAD3P84022 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.84■□□□□ 0.45
SMAD3P84022 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.84■□□□□ 0.45
SMAD3P84022 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMAD3P84022 SERBP1P3-201ENST00000459980 809 ntBASIC17.84■□□□□ 0.45
SMAD3P84022 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.84■□□□□ 0.45
SMAD3P84022 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SMAD3P84022 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SMAD3P84022 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.84■□□□□ 0.45
SMAD3P84022 BTNL10-201ENST00000595971 695 ntBASIC17.84■□□□□ 0.45
SMAD3P84022 WFDC1-204ENST00000613603 549 ntBASIC17.84■□□□□ 0.45
SMAD3P84022 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMAD3P84022 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.84■□□□□ 0.45
SMAD3P84022 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
SMAD3P84022 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms