Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.36□□□□□ -0.11
AP3S2P59780 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.36□□□□□ -0.11
AP3S2P59780 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.36□□□□□ -0.11
AP3S2P59780 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.36□□□□□ -0.11
AP3S2P59780 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.36□□□□□ -0.11
AP3S2P59780 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.36□□□□□ -0.11
AP3S2P59780 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.36□□□□□ -0.11
AP3S2P59780 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
AP3S2P59780 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.36□□□□□ -0.11
AP3S2P59780 AP003733.1-201ENST00000491725 852 ntBASIC14.36□□□□□ -0.11
AP3S2P59780 AC122714.2-201ENST00000502787 707 ntBASIC14.36□□□□□ -0.11
AP3S2P59780 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.36□□□□□ -0.11
AP3S2P59780 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.36□□□□□ -0.11
AP3S2P59780 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.36□□□□□ -0.11
AP3S2P59780 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.36□□□□□ -0.11
AP3S2P59780 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.36□□□□□ -0.11
AP3S2P59780 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
AP3S2P59780 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.36□□□□□ -0.11
AP3S2P59780 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 AC097637.2-201ENST00000624096 1997 ntBASIC14.36□□□□□ -0.11
AP3S2P59780 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
AP3S2P59780 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 AC067750.1-201ENST00000608826 6545 ntBASIC14.36□□□□□ -0.11
AP3S2P59780 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.36□□□□□ -0.11
AP3S2P59780 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
AP3S2P59780 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S2P59780 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
AP3S2P59780 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
AP3S2P59780 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.35□□□□□ -0.11
AP3S2P59780 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S2P59780 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 ABHD17AP1-201ENST00000358206 933 ntBASIC14.35□□□□□ -0.11
AP3S2P59780 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.35□□□□□ -0.11
AP3S2P59780 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
AP3S2P59780 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
AP3S2P59780 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
AP3S2P59780 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.35□□□□□ -0.11
AP3S2P59780 AC128688.1-201ENST00000487626 519 ntBASIC14.35□□□□□ -0.11
AP3S2P59780 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S2P59780 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S2P59780 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S2P59780 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.35□□□□□ -0.11
AP3S2P59780 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.35□□□□□ -0.11
AP3S2P59780 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
AP3S2P59780 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S2P59780 AP002414.2-201ENST00000591780 3365 ntBASIC14.35□□□□□ -0.11
AP3S2P59780 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.35□□□□□ -0.11
AP3S2P59780 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
AP3S2P59780 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S2P59780 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.35□□□□□ -0.11
AP3S2P59780 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP3S2P59780 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
AP3S2P59780 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.34□□□□□ -0.11
AP3S2P59780 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.34□□□□□ -0.11
AP3S2P59780 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
AP3S2P59780 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.34□□□□□ -0.11
AP3S2P59780 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms