Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CLDN20P56880 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN20P56880 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CLDN20P56880 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
CLDN20P56880 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CLDN20P56880 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CLDN20P56880 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.32■□□□□ 0.04
CLDN20P56880 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN20P56880 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN20P56880 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN20P56880 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
CLDN20P56880 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN20P56880 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN20P56880 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
CLDN20P56880 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.32■□□□□ 0.04
CLDN20P56880 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN20P56880 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN20P56880 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN20P56880 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLDN20P56880 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN20P56880 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN20P56880 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN20P56880 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN20P56880 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN20P56880 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN20P56880 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDN20P56880 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDN20P56880 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CLDN20P56880 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLDN20P56880 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CLDN20P56880 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN20P56880 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN20P56880 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN20P56880 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN20P56880 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN20P56880 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN20P56880 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN20P56880 AC010507.1-201ENST00000633895 436 ntBASIC15.31■□□□□ 0.04
CLDN20P56880 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN20P56880 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN20P56880 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN20P56880 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN20P56880 AC092068.3-201ENST00000587894 2016 ntBASIC15.31■□□□□ 0.04
CLDN20P56880 AC005915.1-201ENST00000624912 2018 ntBASIC15.31■□□□□ 0.04
CLDN20P56880 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.31■□□□□ 0.04
CLDN20P56880 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CLDN20P56880 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN20P56880 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLDN20P56880 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CLDN20P56880 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN20P56880 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 AC023274.1-201ENST00000418278 595 ntBASIC15.3■□□□□ 0.04
CLDN20P56880 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN20P56880 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN20P56880 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN20P56880 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLDN20P56880 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms