Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 AF238378.1-201ENST00000526806 358 ntBASIC15.87■□□□□ 0.13
CLDN8P56748 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN8P56748 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN8P56748 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN8P56748 PRELID1P1-202ENST00000567272 903 ntBASIC15.87■□□□□ 0.13
CLDN8P56748 AC005412.3-201ENST00000580309 715 ntBASIC15.87■□□□□ 0.13
CLDN8P56748 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.87■□□□□ 0.13
CLDN8P56748 LINC01711-201ENST00000598340 967 ntBASIC15.87■□□□□ 0.13
CLDN8P56748 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.87■□□□□ 0.13
CLDN8P56748 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CLDN8P56748 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN8P56748 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CLDN8P56748 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN8P56748 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN8P56748 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CLDN8P56748 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN8P56748 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN8P56748 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.86■□□□□ 0.13
CLDN8P56748 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.86■□□□□ 0.13
CLDN8P56748 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN8P56748 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLDN8P56748 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN8P56748 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
CLDN8P56748 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN8P56748 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN8P56748 MIR1224-201ENST00000408193 85 ntBASIC15.86■□□□□ 0.13
CLDN8P56748 HCG4-201ENST00000418983 998 ntBASIC15.86■□□□□ 0.13
CLDN8P56748 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.86■□□□□ 0.13
CLDN8P56748 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.86■□□□□ 0.13
CLDN8P56748 AC010654.1-201ENST00000615722 808 ntBASIC15.86■□□□□ 0.13
CLDN8P56748 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN8P56748 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN8P56748 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN8P56748 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 AL603832.2-201ENST00000566195 2125 ntBASIC15.86■□□□□ 0.13
CLDN8P56748 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN8P56748 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN8P56748 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN8P56748 AC024909.3-201ENST00000611513 2257 ntBASIC15.85■□□□□ 0.13
CLDN8P56748 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
CLDN8P56748 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN8P56748 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN8P56748 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLDN8P56748 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CLDN8P56748 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN8P56748 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN8P56748 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN8P56748 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 AC073621.1-201ENST00000392730 636 ntBASIC15.85■□□□□ 0.13
CLDN8P56748 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.85■□□□□ 0.13
CLDN8P56748 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLDN8P56748 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.85■□□□□ 0.13
CLDN8P56748 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN8P56748 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLDN8P56748 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN8P56748 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN8P56748 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN8P56748 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLDN8P56748 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
CLDN8P56748 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLDN8P56748 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLDN8P56748 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN8P56748 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN8P56748 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN8P56748 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms