Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CR1P49238 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CR1P49238 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CR1P49238 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CR1P49238 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.69□□□□□ -0.06
CX3CR1P49238 AC007326.2-201ENST00000624224 7579 ntBASIC14.69□□□□□ -0.06
CX3CR1P49238 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CX3CR1P49238 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CX3CR1P49238 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.69□□□□□ -0.06
CX3CR1P49238 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
CX3CR1P49238 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.69□□□□□ -0.06
CX3CR1P49238 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.69□□□□□ -0.06
CX3CR1P49238 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.69□□□□□ -0.06
CX3CR1P49238 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.69□□□□□ -0.06
CX3CR1P49238 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.69□□□□□ -0.06
CX3CR1P49238 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.69□□□□□ -0.06
CX3CR1P49238 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.69□□□□□ -0.06
CX3CR1P49238 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CX3CR1P49238 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
CX3CR1P49238 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.69□□□□□ -0.06
CX3CR1P49238 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.69□□□□□ -0.06
CX3CR1P49238 AC107918.4-202ENST00000641623 219 ntBASIC14.69□□□□□ -0.06
CX3CR1P49238 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CX3CR1P49238 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.69□□□□□ -0.06
CX3CR1P49238 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.69□□□□□ -0.06
CX3CR1P49238 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.69□□□□□ -0.06
CX3CR1P49238 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CX3CR1P49238 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.69□□□□□ -0.06
CX3CR1P49238 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CX3CR1P49238 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.69□□□□□ -0.06
CX3CR1P49238 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.69□□□□□ -0.06
CX3CR1P49238 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CX3CR1P49238 AL513477.1-201ENST00000602865 2407 ntBASIC14.68□□□□□ -0.06
CX3CR1P49238 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CX3CR1P49238 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.68□□□□□ -0.06
CX3CR1P49238 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CX3CR1P49238 AC092364.2-201ENST00000596710 2692 ntBASIC14.68□□□□□ -0.06
CX3CR1P49238 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.68□□□□□ -0.06
CX3CR1P49238 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.68□□□□□ -0.06
CX3CR1P49238 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CX3CR1P49238 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.68□□□□□ -0.06
CX3CR1P49238 KRT18P56-201ENST00000507275 550 ntBASIC14.68□□□□□ -0.06
CX3CR1P49238 AC073648.2-201ENST00000510116 352 ntBASIC14.68□□□□□ -0.06
CX3CR1P49238 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.68□□□□□ -0.06
CX3CR1P49238 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CX3CR1P49238 MPDU1-223ENST00000582151 728 ntBASIC14.68□□□□□ -0.06
CX3CR1P49238 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.68□□□□□ -0.06
CX3CR1P49238 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CX3CR1P49238 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CX3CR1P49238 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.68□□□□□ -0.06
CX3CR1P49238 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.68□□□□□ -0.06
CX3CR1P49238 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.68□□□□□ -0.06
CX3CR1P49238 LINC02199-201ENST00000506655 2702 ntBASIC14.68□□□□□ -0.06
CX3CR1P49238 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CX3CR1P49238 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CX3CR1P49238 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.68□□□□□ -0.06
CX3CR1P49238 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.68□□□□□ -0.06
CX3CR1P49238 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CX3CR1P49238 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CX3CR1P49238 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.67□□□□□ -0.06
CX3CR1P49238 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CX3CR1P49238 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms